Id Trinity | TRINITY_DN45091_c2_g1_i4 |
---|---|
Name Transcript | Ll_transcript_412132 |
Sequence | TTTTGTTTATCATGAGTCTTACACCATTACATTTAGTTCATTTTATAAGTGATTTGCCAAAATAGAATTAACATTTTGGTTAAATAGATCCCCAATAGAA GAGACACTATTGTTACAAAAGCCAATAATCTGTGGATCATTTACACAATTGCAAGGTTTCTAGGGTTTGAAATATAGAATTGGGCGCAATTTCAATAATG TATAGTTCAAGATTTCGTTTGGAACAAAGAAGGACCAAATTCAGATTCAGATTTTCTTCTCGAAAGCTTCTTCGTACCATCATTCTCTGTCTCGTCTTGT TTGCGATTTTGCCTCCCATTTTCTTTCACTTTCGCCTCTCACGCTTTCATCAGATTCAAGTGAGGAAGTGTGGTTGGCTTAATAATCCTCCTCTTGTATG TGCACATGGGGGTGATTCATCTAAGGCATCATCCAACACATGGACTGTATTGAGATTGATGTCTCTCGATCTTCAGATGGAGTTTTGTTTGCTCTCCATG ATAGGCAGGGATTTGCAGAGGCTATCTGGAAACACAACTTCTAAAGTTGGTCACATGAGCTCAAAAGAGATAAGAGAGCTTGGTTCTACACGTCGTTCTG TTGAGAAGTTTAATGATGAAAGTATACCCACCATTCAAGATGCTCTATTGGTAATATTCTAGAATGCAGTAATATTTTCTTCCCCAAGTTATTTCTTCCA AATTTTTAGATCTATCATCCTACCCTTTCACCTCTTTGTAGTTTGCTTTTGCTATCTTTGACTATATTCGGTTTCTATATTTGTTGACAACTTATCTTCT TTCATGTCATACTTCTCCTTTCTATAGTATATTTGACTACCTTCGAATTTGTTTATTTATTTTCAGTTGACTTCAAATTCAGTAAAACAGATAGTTTTGG ATGTTAAAGTTGGACCCCCATTTTTTGAGAAAGGACTTGCCAAAGATATTCTCTCTATTGTACGTATAATGCTTCTGTCCGACCCTTTCCCTCAGGCACT ACATAAATGTTCATTTAGCTACAAGTGTCTCTTCTTGTTTTCTTTGCATATTAGCATGATTACTGCATTAAAGCTTTAGTTTTCCCTTGAGTGGACAGCC TGCAAAAAGTATTTATGAGTGCCATCAAGAAGATTGCCGATAGTGAGCATATGGCCATTACTGTTAATTTTTGGGCTCTTACTGAATGTTATCTTAAGTT CTAATATTTCTTTTCATACCTTTTGTCAATGTTAAATTTTTTAGAATTACTACATGGTTGTCTTAAAAATGTTAGTTTTCCATTAAGATGGTTTGAAATC TTTACATTCATCTCAATATCTACCCTCTCCTTGTTTTGGTCACCCATGTCCCCCTGTTTCATAGCTTAAAAACAATGCAGCATGCATTATAAAATGAGCA ACACAGTGACCTGTACTTCCTACTTACTGAGCTTTTGGTAGCCCAAAATTGTCAGCTCCTCATAAATTGTTCTAGCATAGCTTTATTATCTGCTAGATTC CTCTGTGGTCTTCAATTAGCTGGGTCTTCTAGCGATTGAGAGTAAATGGAGAAGGAAAGGATATAATGAGGTGGTTGTGATAGTGTTGCCAGCTCAATGG TGCTCCTACAAGCTAGCAGGCATAGATTTATGATACATCAAAGCAAATATTAAAGATTAGTAATGTCTGTTTTCTAGATATTATATTTCCAAGACAATCT GGATTGGGTTAAACTTGGTTAAGCTAGTCTACAATCTTGATGTGTCCCAGTCATCTCAAGCTAAGTATAATGTAGTAGTCCCAGCAGCAAGTGTATTTAT GTTGTCTTGAAAAATATTATCACTTTATTTATGCTTTTGAGGTAATGTATTTGTTTTAAGCGTTCAATGCAATCTGTCCTTCAGGTGGAGAAAACAGAGT GCAGAAACTGCCTCATATGGGCTAAAAGTGACAATTTAGCAAGGGAAGTGATTAAAATCTCATCAGATATGAAGGTATGAACCAATTTAGTTAGATTAAT TCTACTTACTTTTTCTTGTTTCAGTGTCTAGAAAGTCTTAACTCGTACCAGTAAAAATCTTCTGTTGTATTGTATTTGTTGTGGCTATTTTGGATCTAAA GTGGCAAAGGAAAATGAACGTGGATTACTATTTTTTTTATAAAATATTGATTGGCTGGGGAACATAAGAACAAAAAATTGTAACAGCTTTTTGGCCTGCA GTGTATTAACTTTCCCATTTCAACACAGCAAAAAGGTATTTGCTTATCAGCAAATAGACAAGTTATCAAAATTGGTCTACTGGACCAACCTGGTTGGCTC ACCATGAGTTGCCCATGGTGTGAGTTTGGCCAGGTTCACCCACTATAGTGGTGAGCCCAAATTGGCCATCCCAGCTCAACCCACCAGGGTTGTTGGGTTA CATGGGTTGGCCTACCAATTTGTTTAAAGAAAGATTTACACGAACTCCACACTATTATATAAACTGACTATGGTGTCTTGACATTTGTTATGCGTAATTA TTTTTGTTGTATTTATTACTGACAAGATAAGTATTCTGTATCATAACAATGATACTACATGGAACTGCATTTTAGAAGTATTTTAAATATTACTTTCATC CTCCACTTCTATTTCTATGTATTTTAAGCCTGTGGTGATGCAGGTTGGGTACATTGTTATGAGGGAACCTAAAACCGGCGCTAGAACAAATTTGTTGAGA ATGAAAGGAGCTGAGGTTGTTGGTGTCTACCACCCATTGATAGATGAAAAGCTTATGAAAATTTTGCGCAGGTATGATTTTATATCAAACCTCTATTATC TGGCAGCCGATCACACCTAGTGGGAATAAGGCTTGGTTGTTATTGTTGATCTGGCTTCGGCAGCTAGCAGCACGGATGTGTACGTGTAGTGATCATATTT TGGGTTGTGGTTGTCAGGAGGAACAAAAAGGTGTATGCTTGGACAGTTGATGATGAGGAATCCATGCAAAAGATGTTGTTTGAGAATGTTGATGCTATTG TTACTGGCAATCCAACTTTACTGCAGCAGCTAATGCAAAATACCAAAACACAATGTCTTGAAGAAGGTTATTCATTACCAAACTAATGTTTTGTTTCAAT GAACATAACCATTGTTTTAATGATGGCTTGTTCATGATGTGATACTTAAAGCACTAATCCTATGTGTAATCTCCATTCTTTTCTTTGTTACAGATTGACA TTTAGCTGAAATTTGCTAATAATTTCTTTTCATAAAAAAAGCACCATCTTGTTAATTTCTGC BLAST |
Tissue | pods |
Gene name | LI_gene_138904; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_412132
Blastp | Glycerophosphodiester phosphodiesterase GDPD4 from Arabidopsis with 37.91% of identity |
---|---|
Blastx | Glycerophosphodiester phosphodiesterase GDPD4 from Arabidopsis with 37.5% of identity |
Eggnog | glycerophosphoryl diester phosphodiesterase(COG0584) |
Kegg | Link to kegg annotations (AT1G71340) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019434592.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |