| Id Trinity | TRINITY_DN45095_c0_g2_i3 |
|---|---|
| Name Transcript | Ll_transcript_411954 |
| Sequence | CTAAAGTTGTTCTTAAGGTTTTATGCCTTTTTTAATTACACAGCTTTATAATTTTAGCACATGAATTACTTGTTTATTTAACTCATTTTATAATCCATAT TTTTCTTCTTCCATGTTTGCCCTATTAGGTTATGGAGGAAGCGTGCATCGAAATTAAGGATGTTACGTGAACAGCGGCAGTTAGCATCAAATGCTGCACT AGACTCATTACCACTGGGCCCCCCAATTCGAAAGTATACAGATCTTTCTGGTAATTTTGAGAAGTTTGACGTTGATATAGCTATGAGGGAGAGATATGAA AAACAGGAAAAATCATGGGCGAGAATTAATGTTTCAGATATAGTTGCTGGTACATTGGGCAGAAGAAATTCAGATGCTAAATGCTTGTGCTGGAAAATAA CCCTTTGTTCTCAAATAAGTAGTAAACATGAAATGGGGGCTGCAGGCTCATGGTTGACCTCTAAGCTCATGCCTTCGAATGACAATGATGTGGTTGTTTC ATCTCCTGGCTTGGCAATATGGAAAAAATGGGTTTCTAGTCAGTCTGGCATTGATTCTACATGCTGCTTGTCCGTAGTTAGGGATACAGCATTTGGTAGT GTAGATGAAGTTGTACCTGGGACAGATGCAGTTTTGTTTCTTGTCTCTGAGAGCATCTCATGGGAACACCAGAGAGTTCACCTCCACAATCTTCTGATGT CAATTCCCCCGGGAGCTCACTTGCCACTACTGATCTTATGCGGCTCATATGATGAAGGATTCTCTTCTGTTATAGTTAATGAACTGAACCTTACAAACAT TGATAAATTGCGGGTTAGTAGCTTTCGACTTGTTTTCCTCGTTGAAAACCATCAGACAGTACACTTGCGTGGGTTTTTCAGTGATAAACAGTTACAGGAG GGACTGCAGTGGCTGGCCAGTGAAGCACCCACACAACCCTTTGTTCGTTGTGTGAAAATACGAGAACTTGTTCACATGCATCTTAATTCCTTATCAGAGG CGCAGAATTTTGCCGGCATTTCCAAGTTGGGTCCTAATGACTGCATCTCACTGTTCAATCAAGCGTTAGATTGCTCAGTGCAAGAAATTATTACTGCTGC CAATTCAAATCCTACTGGTTGGCCATGTCCAGAGATCAGTTCACTTGACAAGTCTTGTGATGAAGACAGAGTAGTAAAAACGTACTTGCCAACTTTGGGG TGGAGCTCAAATGTTAAAATTGAACCAATTATTTATGCTTTGCAAAACTGCAAGCTTCCCACTTTTTCCAATGATTTCTCCTGGTTGGCCAGAGGTTGTA AAGCTGGCCATGAGATCGAGAACCAGAAGGTACAGCTCGAAAATTGCTTGGCCGGGTACCTGACTAATTCAAGTAAAATGATGGGAGAATCATTGGCCAC GAAAGAGGCACATGTCACGGTGCAAACCTGTGCTGGACTTGAGCTGTGTGGCTCAAGCTATCGTGTAGTTCCGCGATGGGGTATGATTTTTCGTCGAATT TTTAACTGGCGACTAAATGGTTTGTCTAGTAGGGAAATATCCACTGCTTACATCTCAGAAAGTCACCATGTTGCTCTTCCAAGTTCAGATCAAGGTTTGG GCTTTGAAGCAAGTTTACATCCATCCTATAATCTGAACACTTGTTTAGATGAAATGATCAGTGTTAGCTGCAACTTTCCTCTTCATGTTCATAATCAGCC AAGGCCTGAAGATCTCAGACCACTTCCACAAAGGAATTCAAATTATGTATTTCATGAAACTGATAACATGATGGATGATGAAAACAATCTTCATCTTCAA AATTTACCTTACATAAATGCAGCTCTTACAAATGGTGTAAACAATGTGCAGAGCAGAGCATTAGTGAATGAGAAACCAAACAAAGAAGCTGACAAGTTAA GCAAGCTATTGAATCAATGTAACCTGCTGCAGGATGGCATAGATAAGAAGCTGTTTTTATACTTCTGATATGCAGATAACTTTTCTATGCTTCTTTTTTT TT BLAST |
| Tissue | pods |
| Gene name | LI_gene_138909; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_411954
| Blastp | SAC3 family protein B from Arabidopsis with 40.16% of identity |
|---|---|
| Blastx | SAC3 family protein B from Arabidopsis with 40.12% of identity |
| Eggnog | minichromosome maintenance complex component 3 associated protein(COG5079) |
| Kegg | Link to kegg annotations (AT3G06290) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019439752.1) |
| Pfam | MCM3AP domain of GANP (PF16769.4) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |