Id Trinity | TRINITY_DN45113_c0_g1_i3 |
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Name Transcript | Ll_transcript_357702 |
Sequence | ATGCAGAACTTGTTTGGATTGTTTTCGCGGTTTCTTGGAATACAGGCTATTCCAATTCCATCCTTCTCCAACAACAATCATCACTCTCACTATTCTTTTT TCATAAAATACCTCTTCATCTTCTTATTCTTCTACATTCTTCCCCATACCTCATTTCATTCTCTACTACCACTTTTCAAGAACACCATCTTCTCCTTACA AATGAATAGTGCAAAGGGCAAGGGAAAATACAAGGATATTGTTATAGGAGGTGACTCTGGTAGCTCTAGTAGGACCAAATCTATTCATCCCCCAATTGAG ACACATTGGAGTCTTCCTAACTGTGAAGGTAAAAGAACTTCATCATTCCTCATCAAGTCACTGTTGTCCTACCCGCTCATGAAACTTAGAAGGAGCAAAA GCATGCAAGTGATTCTAGAAGGTGCCCGTGATTCGAGAGACGCACAAGTGGTCGAGGATTTCCGCAAAATGCTTTTTATTGAGGGTCTCTTACCTCCTCA ACAAAATGATTATCATACTCTTTTAAGGTTTCTGCGCATGAGGGACTTTAATATGGCAGCAGCCAAAGACATGTTTCTGAATTACTTGAAATGGCGCGAG GAATCTCGAGTAGATATGCTTCCTAAGGAATTCAAATTCACAGAGTACACAGAAGTAAAGAAAATCTATCCTCATGGATTCCACGGAGTCGATAGAGATG GAAGACCAGTGTATATTGAGAGAATTGGGATGGTAGACCCTAACAAACTAATGCAATTAACCACAATTGAAAGGTTTATTAAGCATCATGTGTCAGAGCA AGAGAAAACACTTAGAGTAAGATACCCTGCATGCTCACTGGCTTCTAAAAGGCATATTGCATCCACTACAAGTATCTTGGATGTCAATGGAGTAGGAATG TCTAATTTCTCGAAGCCTGCAAGGTACCTCTTTATGGAAATTCTGAAGATTGATAGCGATTACTATCCTGAGACTCTAAATCAGATTTTTATTATTAATG CTGGATCTGGGTTTAGACTGCTGTGGAAAGCCGTGAAGACATTCCTAGATGTACGCACAGCAGCAAAAATTCAAGTGTTCGGCTCTAATTACCTCAGCGC GCTGCTTGAAGCTATTGATCCAGGGTAACATGGCTTTTGCTTTGCTTATCCAGGATTTTATTATAGAATCAACTTGAACATTTTCTATGAATGTGCTCTT CCTAGAATAAGTACTGACAACTTAATGTGTTTGTGAGGTTCTGCAAGTAACGATAATCCGATATTTTGTTGTCTAATTTTACAGTAATTTGCCTACTTTT CTTGGTGGTAACTGCACATGTTCTGAACATGGAGGTTGCCTGATGAGTGATCAAGGCCCCTGGAAATATCCAGAATTGTTAGAAATGATTCAGGCCATTT CCATGAGAGAAGGGAACGACGACAAATGTGAAAATGGCGATACAGTCTCCGAAGATTCCTTGACGCCGAAAAAGGTGTAGAATTGTTCACCCTTGTCCTA ACTACTACATGGACACACCTTTGCTTAATGTAATGAAATGCAGGTTGACATACAAAACAAAAATGAGTTTCTTACTAGTCTGGCTCTTGAGGAGACAACA TGTATGTTAGCATTACAAAAAATCAATGGTCTAGAAGCTGCTATTGGAGACACCAAGAATATAATCAAGAAACTTGAAGATGCACTTCAGAACACCAAGA TGGTAAGCTCAACATTATTATTGAGTCCTTCCCTCTAGCAAAGTGAAATGACTGTTTCTTTTTCTCTGTTCCAGGCCTTAGAAGAACTTGCACAGCACAT AGAAGAGCTAAAAATGTGAGATTGGATTAGTGTTTTATACCCTAAAAGAACATATTTCTTGTGAACTTTTTCAATCCATATGAGATTGTTGGCTAGGCTA ATATGAGATAGTTATTTTATTGAATGAAGTTTATTGTGAAGTTTCCGTACTATTCTTGTATTTCTTGTGCTACTTTTTGTATTATTGTGAACTTCTAGGC ATGGTTGGAGGATTATCCACACGCCTTTACTAATGTTTGTTGTTGCC BLAST |
Tissue | pods |
Gene name | LI_gene_138944; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_357702
Blastp | Phosphatidylinositol/phosphatidylcholine transfer protein SFH11 from Arabidopsis with 61.84% of identity |
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Blastx | Phosphatidylinositol/phosphatidylcholine transfer protein SFH11 from Arabidopsis with 61.84% of identity |
Eggnog | Transfer protein(ENOG410XRSQ) |
Kegg | Link to kegg annotations (AT5G47510) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019424554.1) |
Pfam | CRAL/TRIO domain (PF00650.19) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |