| Id Trinity | TRINITY_DN45115_c0_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_357967 |
| Sequence | CTGTTTTTTACTTTTTATAAAAAAATTGTATTGCACGTCATTTGTGTTTTGATTTGTACTTTTTATCAGATGTGGAATCATGCTACTTGCATATTGAAGA AAGCCAACCAGATAAAAGAAACTGATGATGTTGAAAACTTGGAGTTGCTTCGTTGGGAAGATCAGCAGAAGATCAGAAAATACATAGAGGAAGGTGGCGG CAGTAGCGCTCCACCAAAATCAAAAGCCACCAAAGACGGTGGTAGTGCTCCACCAAAATCAAATGCCACCAAAGATGCTGAATGTGCTATTGAAGTTTCT CAAACTTCTCGTGCTACTTGCAGGGATTGTGGCCAAAAAATTATCAAAGGAGAGGTTCGCATATCTACTAAGCCTGATGGTCAAGGTGCTAGAGGGTTAG CTTGGCACCATTCCAAGTGTCTCATGGAATTATCACCATCAATTCAAGTAGATAAGTTGTCTGGATGGGATAGTCTCTCTCCTTCCGATCAATCATCTGT CAGTGATTTCGCTAAGAAGGGAGGTAGTAGTGCTACAAACTTTGAGGCCGGAGAGGTTAAAGAATCCACTTCCAAAGGTGGCACGAAACGTGGGAAGGAT GCTGATGGTGGACAGAAATCAAAAGTTGCTAAGGCCGAGGGAGATGTGGCGGCGAGCAGGACAGCATCAGTGAAAAATGCTAATGATTCGGAGGAGGCAC GTGATTTGGAGAGTAGACTGGAGTCCCAGAGCGTAGAAATCTGGGCTCTGAAGGACAATCTTAAAAAGCATGTGACAAATGCAGAGATGCGTGAAATGCT CGAAGCCAATGGTCAAGACTCAAGCGGATCAGAACTGGATTTGCGTGACCGCTGTGCTGATGGAATGATGTTTGGAGGACTTGGTAATTGCCCAATATGT GATGGTTTTCTGCGTTATTCCGGAGGAATGTACCGGTGCACTGGATTCAGTTCTGAGTGGAGTAAGTGTTCCTACTCTACCAGTGAACCACAACGCCTTG ACGGGAAGTGGAAAATCCCTGTGGAAACAACCAACGAGTTTCTTAAAAAGTGGTTCAAATCTCAAAAAGGGAAGAAACCAGTTCGGATATTGCCTCTTCA ATCACCTAAGAAGCCCATGGATGGTCAAACTAGTGCTTCTAAGCATCAATCATCAAATAGTGAAAGTTTGAGGGATTTAAAATTTTCTATTTGTGGATTA CCGAAAGACTCTATTGTGGAATGGAAACGCAAGATTGATGACATAGGTGCAGTCTTTCATGCAAAAGTTAAGAAAGATACTAACTGCTTGGTGGTCGGTG GAGCACTCAATGATGAAGCTGAGATGCGAAAAGCAAGGAGGATGAAAATACCGATAGTTCGAGAGGACTATTTGGTTGATTGTATAGAAAAAAAGAAGAA GCTTCCATTCGACATGTACAAAGTTGAAATGATTGGTGAGTCTTCTAGCATGGTCACCATCAAAGTGAAGGGACAAAGTGCTGTTCATGATGCTTCTGGA CTAGCCGATTCCGGCCACATACTGGAGGAAGGGAAAAGCATATATAATACAACATTGAATATGTCTGATTTGTCTACTGGTGTTAATAGGTAAATTTATT GTATTTTAGCATATATAGTACATTGTTGAAATTTATTGCATTAGTTAGCTAACTAGGAATTTTAAGCTTGGTTTCTACGTAAATGATAAATAGATTTCAA CGAAAGGTATGCTTCTCGATTTTGTTATGCTTTGAAATATTTCATACAAAACCTCAAGCAGTCAACTGAAAATTTGCAAATGTGTATTTGATGAATTCTT TTATGATAAAACTTCTATTGTTTCTAAAGCCACACAGGTTCTTTTTAGAAGTGCAGAAGCTTTTCATAGTTTTGTGTAAACTTCTCGGTTGAATCACTTA TTTTATAATTTCGGAATTTTGATATACATTAACTTTCGTCACACACTTTTCTAAACTAGTTTCTGTAGTTCTGCATAGGAAAGAAATGATGTGCTCAGTA TTATTCTTGTATTCTGTCGGCTGATAAATTATTGTTTTGTACATTATTTGGGGTTGAAATACTCATCACTATCGGTTGTGTAACAAAAAGTTTCTGCACC TTTATCATTAGAAAGAACTATTACTTTCGGCCTTTATCATCTTCTAACCTTTTCATGTAAAGTTACTACGTTCTCCAAATTATCGAAGAAGATAAGGGGT CAGATTGCTATGTGTTTCGTAAATGGGGTCGAGTGGGAAATGACAAGATTGGAGGAAGCAAACTGGACGGAATGCCGAAATCAGATGCAATCCATGAATT CAAACGGTTATTCTTTGAGAAGACTGCGAACCCTTGGGAGGCTTGGGAACAAAAGACTATTAAGAAGCAACCTGGAAGATTCTTCCCATTAGATATCGAT TATGGGGTTAACAAGCAAGTCTCGAAGAAAAAGAATAACGATGAAGACAGCAAGCTACCGCCGCCGTTAATTGAGTTGATGAAAATGCTCTTCAATGTGG AAACATACAGAGCGGCCATGATGGAATTTGAGATCAATATGTCAGAAATGCCACTTGGGAAACTTAGCAAAAGTAACATCCAAAGGGGGTTTGAAGCATT AACAGATATACAGAATCTGTTAAAAACTGACAATCCCGATCCGTCAATGTTGGAAAGCTTGCTTATTGATGCCAGCAATCGGTTCTTCACAATGATCCCT TCTATTCATCCACATATTATCAGGGATGAGGATGATTTCAAGTCAAAGGTGAAAATGTTAGAAGCCCTTCAAGACATTGAAATAGCTTCAAGATTAGTTG GATTCGATGCCAATAATGATGACTCGATTGACGATAATTATAAGAAGCTCCACTGTGATATAGCTCCACTTCCTCATGACAGCGAAGATTATCGTTTAAT AGAGAAGTTTCTCCATAATACTCATGCCCCCACACATACGGAATGGAGTCTTGAGTTGGAAGAAGTTTTCGCACTCGAAAGGGAAGGGGAACTTGACAGC TTTGCTCCTTACAGGGAAAAACTCGGTAACAGAATGCTCCTATGGCACGGTTCAAGGATGACAAATTTTGTGGGCATCCTTAGCCAAGGACTCAGAATTG CACCTCCGGAAGCCCCAGCTACCGGCTATATGTTCGGTAAAGGGGTTTACTTTGCTGATCTGGTGAGCAAGAGTGCTCAGTATTGCTTCACTGATAAGAA AAATCCTGTTGGCCTAATGCTTTTGAGTGAAGTCGCCCTCGGAAATGTCTATGAGCTCAACAAAGCTAAGTACATGGATAAACCTCCCCGCGGAAAACAC TCAACTAAAGGACTCGGCAAAAAAGTGCCGAATGAATCAGAATATGCAAAGTGGAAGGGTGATGTCACTGTTCCTTGTGGCAAACCAGTGCCATCAAGTG TCAAGGCTTCTGAGCTCATGTACAACGAGTACATTGTTTATAATACCGCTCAAGTTAAGATGCAGTTCTTGTTGAAGGTGAGGTTCCATCACAAGAGATG AGGATTGGAGCTAAAAATTTGCTATTTTGGTGTGCCATCTGTTTGCCCATCTTGGATTCTCTAGAATTGTCTTAGTATGGTCTCATCATCGCTTCTCCGG ATTTCGGAGTTTTAAATTGCGATTGCAGTTATGTTGCGTTTATCACAATTACGGAAAACATGGTCGCAAGTATGGTTGTAATGCAGTGGAGTTTTTTCAA CTTTTTTGAAGTTGTGGTCTGGTTGTGTATAGAACCACTGTTTTAATCTCAAACTTTATAGTACTTGGCTCTTCACTTTTTTAGTATGCATTTCATCATT TTATTTATTTAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_138949; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_357967
| Blastp | Poly [ADP-ribose] polymerase 1 from Arabidopsis with 55.12% of identity |
|---|---|
| Blastx | Poly [ADP-ribose] polymerase 1 from Arabidopsis with 81.17% of identity |
| Eggnog | Poly (ADP-ribose) polymerase(ENOG410XP18) |
| Kegg | Link to kegg annotations (AT2G31320) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019456537.1) |
| Pfam | Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region (PF00645.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |