| Id Trinity | TRINITY_DN45129_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_358031 |
| Sequence | ATACAGTTGAGAATTGACAAGACAGGAAATGATTGGTTATTACTATTCAAGATTCGGAAACAGATAACAAGAAAACCAAACCCCCCACAACCTATGAAAA GGATGATTCTAATTTCCAAGACACACAACTCACTCACTCACTCTCTCTCGTGTAACTTCTTCATCACATGGCATCTTCTTCCCTCATCAACTTCAATCTC TTTCCCTCAAAACCACTTCACCATCAACTGATTAAAATTTCAAAACCTATCCTTTCTTCATCTCACTTCAATCCACCCTCGCTTTCTTCCATCAACCATC GCTTCAGGCCCATCACCTATCCGATTCTTCCATTTCACTCTGCTCCTAAGCTCATATTCCACGTCAGCACCCCATAATCTCAACAATTCTCACCAAAGTT CCATGCTTTTTAATCTAATTTGGACTCTTCCTATTTTGGGCAGGTTAGAGCACAGAAGGAGTACTCTGCTGGAGACCCATCTCAGACCCAGGAGGATTTT TCTTGGTCTTCTGTCATTTTTCCGTTTCTGTTTCCTGCATTGGGTGGCTTGTTATTTGGTTATGATATTGGTGCCACCTCTGGTGCTACAATTTCGCTGC AGTCTCCTGAGCTTAGTGGTATAACATGGTTCAATCTTTCTGCCATCCAGCTTGGACTTGTGGTCAGTGGTTCCCTGTATGGGGCTCTTTTTGGCTCACT TCTTTCATATGCCGTTGCTGATTTCCTTGGGAGGAAGCGACAACTCATTACTGCATCCCTGTTGTATTTGCTTGGTGGTGCCATCACTGCCTATGCACCA GAACTCGGTGTCCTCTTAGCAGGAAGGCTACTCTATGGACTCGGTATAGGTTTGGCTATGCATGGGGCTCCTTTATATATTGCAGAAACTTGTCCATCAC AAATCCGTGGAACTCTAGTATCATTAAAAGAACTCTTCATTGTCCTCGGCATTCTGCTGGGTTATTTTGTGGGAAGCTTTCAGATTAGTGCAGTTGGGGG ATGGCGGTTCATGTATGGGTTCAGTGCTCCAGTTGCTGTATTAATGGGTCTTGGAATGTGGGCTCTTCCCGCCTCTCCGCGGTGGTTGCTTCTCAGAGCA GTTCAAGGGAAAGGTTCTTTTCAAGAGTTGAAAGAAAAGGCAATTTTTTCCCTCAGCAAATTAAGAGGCCGACCGCCTGGTGATAAAGAATCTGAGAGGC AAATAGAGGAGACGCTTATCTCGATGAAGTCCGCCTATGCAGATCAGGAATCAGAGGGAAGTTTCTTGGAGGTGTTTCAGGGTCCCAATTTGAAAGCCTT TGTAATTGGTGGAGGGTTAGTCTTCTTTCAACAGATAACAGGCCAACCAAGTGTCCTCTATTATGCAGGCTCAATCCTTCAGAGTGCTGGATTTTCTGCT GCATCTGATGCTACTAAAGTCTCAGTTATTATTGGCATATTCAAGTTGCTAATGACATGGGTTGCTGTCCTAAAAGTAGATGATTTGGGGAGAAGACCAC TGTTGATTGGAGGTGTCACTGGCATCGCCCTTTCTTTGGTTCTGCTCTCTGCCTATTATAAATTTCTCGGAGGATTCCCAGTTGTGGCTGTTGCAGCCTT ACTTCTTTATGTTGGTTCCTACCAGATATCATTTGGACCAATAAGTTGGCTTATGGTATCAGAAATCTTCCCAATTCGCACTAGAGGACGAGGGATTAGT CTGGCTGTTCTTACTAACTTTGCTTCAAATGCTGTTGTCACCTTTGCATTCTCGCCATTAAAGGAACTTCTGGGAGCAGATAACCTTTTCCTCCTTTTTG GGGCTATTGCTCTGGTGTCACTTCTGTTTGTTATATTTTCCGTCCCAGAGACAAAAGGCTTGAGCCTGGAAGAGATAGAATCCAAAATCTTGAATTGAAG ACTTAAACTTGCACCCTGTGATCCCAATAAAGTTTATTTTGGTGAGTCTGTAACCTTGTATATATCTCCAGTGTGGGATTTGATGGCCATGCCTATGTTT TCAGTAAGACATTGAGTCTCTAACCACGATGTTCAAATCGCAAGGGTTCTGACTGATTGTTTTAATATTCATGATTCGGTTGCCAATAGGGCTGCCTTAC TAATAAAGGATCTGTAGCAGTCCTAGTGTGATAACTCTATACTTTAATTTGATTTCTGTTACTGTGCACCTTTCTTGGTAATTTAATAGCTGTAAACGTT TAGCAATAGTATATATAGGACATTTGTCACTAAATTTATTCTCAAAATTGTAGATGTTATTAAGCAAAGTTAGATGAGGGAAAAGGTAGATGAGGGGAGC TTTAATCTATTGTATTTAGAAATAGAAGACTCACTCTTGTTGAAATAAGGTTATGTAGCATATTAAGTTAAAAACGGAGTTTTTTAACACTCCAATTTTC TGGCACCTTTACCTTGCTAAATTCTAATGTAAGTGCCATGTTTATTATGCTTCACAGCTTCTCATAACCAAAGAATACTCCACTGCCAAAATAAAAAATT GAAGAATATATAATGGTATTATACAAAAGAACATTTCTCGTACAAATATACAACAAATTCTCCTGATCGTTACATAGTGAACGAACAGAGCTTATTACAT ACAAATGGATAAATTTTACAATTATGACGGAAATCAGCATTCCAGTCAAGTTATTTGGTATATACATTAAAAGGTAGAACATAAATTGAATACGTATACT TAATTTGAATACCCATCTTAGGAGGACTTTCAATTTGCCTGAAGAATTCTGCCATGGTTTTCTTCCTGAACCACTGCATATAATACATTTAGGAAGATAG ATCACATGAAACCCCTTAACTTATCTATATTAATATTAGTTTTGGCCTGTTTATTAATTTAGTTACTCTTTTTTTTTAATAAATATATATTCAAAAGATC AGATGATATATCAGACAAATACCâBLAST |
| Tissue | pods |
| Gene name | LI_gene_138978; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_358031
| Blastp | D-xylose-proton symporter-like 3, chloroplastic from Arabidopsis with 84.39% of identity |
|---|---|
| Blastx | D-xylose-proton symporter-like 3, chloroplastic from Arabidopsis with 80.04% of identity |
| Eggnog | Transporter(ENOG410XNQK) |
| Kegg | Link to kegg annotations (AT5G59250) |
| CantataDB | Link to cantataDB annotations (CNT0001067) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019448611.1) |
| Pfam | Sugar (and other) transporter (PF00083.23) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |