| Id Trinity | TRINITY_DN45159_c0_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_357778 |
| Sequence | TGTCGTAATAATTGTTAGCATTTTCTCTTCTCACAATAATTGATTATTCTGAATTGAGTGAGTAAAGTATTTAATATTCTTAATAAAATATGATTTAATA TTATATTTTTAATCATAATAGCTTTTAAGGATGGCGTGAAGACATTTTCAGCTCTTTTGCTCTATCTGCACTCGTAGACGCCAAGAACCCTAGTACTAGC AGATGCAGAAACCCACAATTTGGTTTCAGTAATTTATCTGTTTTGACTCTGAAAACAAAGGTTTGTGAGGAGAAAACGATGGAATAGAAGTTTAACTAGA GTACATTATTGTCTTCATCATTTTTTGTATTGCAATGGATGGAGATAATGGTCTTAACATGCGTAATTGGGGTTACTATGAGGCTACAACACCATTTAAG AACCACCTTGGACTACAGCTGATGTCCTCCGTGCCCGAAAAACAACCTCTGCTTGGAGCACGCAATGCTGCTGCTCCATTCCACCATAGGGACGTTGGGA TGTCCCAACCGGCGTACCCTATGGAGTACATGAGGAATGCTTGGATTGGTCATAATCATAGAGATAGGTTTATGAACATGAATATCAATATGATACCTAC AAATCACAATTATTCTCTTGCTCCCGAAACATCATCAGCTCATCAAATGCAAATGGTTGAAGAGCAAGAACAACCTACTGAACTGTCTGAGGAAGAAACA CCGACGGAAGAGGAGACACCTGTTGAGAAGGTCAATGGAACTGGAAAGAAAAGGGGCAAGGGTTCGAAGGTTCCCAAAGCCCTGAAGGCGAAGAAGACCA AGAGAGGACCTCGTGAGCCAAAGGATGAGAATGCTCCATCAGTTCAACGAGCTAGGACTGTAAGGAAAAGTGCTGAAATTGTAATAAATGGGATTGATAT GGATCTTTCGAGCATCCCTATACCTGTTTGTTCATGCACCGGGGCACTTCAACAGTGTTATCGATGGGGCTCTGGTGGGTGGCAATCTGCATGTTGCACA ACAGGCATATCAATTTATCCTTTGCCTATGAGTACCAAGCGACGTGGGGCGAGGATAGCTGGAAGAAAAATGAGCATAGGAGCGTTTAAGAAAGTTTTAG AGAAACTTGCAGCTGAGGGTTATAACTTCTCTAATCCAATTGATTTGAAGACTTATTGGGCAAAACATGGCACCAACAAGTTTGTCACTATCAGGTAGCT TTACTCTAGTAAAGTATCCAGCAAATTTGCCTTGTGTATATATGTATCTTGTTTCAGACAGAGGCTTCTTAGATGGTTTGTACTTTTCACTCAGATTTTT AAAATTTAAGTGGCATTTTCTTTTCTCTTGCCTGCCACATTGTTCTGATCACTTATTTTGATTTAGTGAATGGGAAATCAGTCTTGTCATTGGTTGATCC TGAAAGGTGATTTTATTGGTATCTACAAAGGAAATTGTCTTTCCTTGATTC BLAST |
| Tissue | pods |
| Gene name | LI_gene_139051; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_357778
| Blastp | Protein BASIC PENTACYSTEINE1 from Arabidopsis with 48.01% of identity |
|---|---|
| Blastx | Protein BASIC PENTACYSTEINE2 from Arabidopsis with 48.14% of identity |
| Eggnog | GAGA-binding transcriptional activator(ENOG410YBIV) |
| Kegg | Link to kegg annotations (AT2G01930) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019432643.1) |
| Pfam | GAGA binding protein-like family (PF06217.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |