| Id Trinity | TRINITY_DN45216_c0_g1_i7 |
|---|---|
| Name Transcript | Ll_transcript_400936 |
| Sequence | AACCCGCCTTCATGGTGTATGTCTTCTATTCTAGTTGTTCTCTTTCCAAGTAATAATATGGGGTTGATTTGTTGTGTAGAATTCAATACTTGAACAGGGA ATGCAATATTGCTTCTAATATTTTCATCAAACTTCAATTTTTTATTGAAATCTTGGTGGTAGAGTTCTTATATTTTGAACCTTTTTGTAAAGCTTATTGT ATATATACATGTCTTTTATATATTACCTGTCTTTTTATATTCATATTTTATGTATGTTAAAAAATGCTTGGCCCTTTGAATAGGGTATTGTAGTACTCAC ACATGCGAAAAGGCCATACTGAGTGGTTTAATTCATGTCTCTGCATTAAATAATGACTACTAACTATGAAAGGTTACATTTTGTGATTTGTGGTTTATGA TAGTGTAATTTTATGTTACTTGCACAAGCATCTTCCATCCAAGGAGATGGAAGTAGTGATGACCGAATACAAGGTTTTGTGAGTGATACATTTTTAACCT TAAATCGACTGAATATTAGGTGAACCTGTCTCTTTTTGGTCCTCTTATTTTTTAGTTTTATGTGAATGTAGACATGCTTTCTGCATGCACTACTTGGTGG CTAATCTCCTGACTTGGTTTTATTTGGCAGGTAAATTATGGAAACTTCATGCATGGGCTTACAAAAGAGAATATCCAACTTAACAGAAAGGTCCTGTCAG AGTTATCCATGCATGAACCATATAGCTTCAAGGCGCTAGTGGATATATCGCAGAAGGCATTTCCAGGAAACAAGAATGTGGTGATTCCTCCAAGAAAGGT GAATTTGTAGAGCATTTGGCTCTTAACCAAACTATTAGATTAGAGCTAAGTTTCTATCAGAATTGGTAAGGACCTTTCAGGATTTTGGGTTTGGCACCCT ACAATTTATTGTAAACTTGCATGCCTTTGATTCTTGTGACCATGTTGAGTACTGTTGTGGTCTTGATGTTACTCCTCCAGCCTCCCTTTTACTTGCTTCA GTATCAATAATTGATCAAATTGTTGCCATTATTAGACTCTATCAAAAGCTGAGATTTCACATTAGTTGGTTGTTTTGCATTTACAAATTTCAACTTGGTT CTGAACCCAAAATGACATTTTAGAATTGGTAAGTACAGACATTCACATTTACAGAAGGAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_139154; |
| Additional information | - |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_400936
| Blastp | - |
|---|---|
| Blastx | 50S ribosomal protein L20 from Elusimicrobium with 53.33% of identity |
| Eggnog | Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit (By similarity)(COG0292) |
| Kegg | Link to kegg annotations (Emin_0348) |
| CantataDB | Link to cantataDB annotations (CNT0001777) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019459247.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |