Ll_transcript_401032

Id TrinityTRINITY_DN45219_c0_g1_i5
Name TranscriptLl_transcript_401032
SequenceCGAATATTTAAATATTATTACTACTTTTTATATATTTTCAGCATTCATATTAATCTCCAAATTTTTATGGTTAAAAATAATATTAGTACTTTTTATTTTG TTCTATTTTCCATTATAAAGAGAAAGTCAGAAATTATAAGGACGAAGACCTAAATTGATAAAATAAAATTAGCCGAACTATTTTTGAAGTAGTGCTAGTA GCCTCTCCAATGGCGGAACACAACGAAGCCACGAATGACATAACCGAACCCGAGTTGACACATGTTGCTGAAAACCCCGCCATCAACGAAAACGACGCTC CATGCGACTTAAACGGCGTGCTACAATCTCTGCCTTCCAACGTCATCAATGACTTGTTATCCTTCGGGATATGTGTCCGATGCATTTTTCGGGTATTTGG TGTCAGAGGACGCATCTATGCCTCACCAGATTTGGCAGTGAACAATCTGAAGGATAATTTGAAGAGCTCTGAAAACTCAAATACTGCAAAGGAAACTAAG CTTTGCAGGCTTTGCTTAGGGATACTGCAGTTTAGATTTGTTGATGAGAAGGAAGTGGTGGTGAAAAAAGATAGTGTTGATGATATGGCTGTACTAATTG CTGAAATGGTAAAGAAGGAGGGTTATCAGATTGATGGTTTTTCCTTTGAAGTTTCTGTCCCACCTGTTCTACTTGAAAATGATAACTCGTTTTGGTCATA TATGAAATCAAAATTTGGATCTGAACCTTGGTTCCAAGAAAAGTTACATACTGAACGTATCTCTACAAAGGATGCATTAAAATTTTCACTAGTATCTCCT CTTGAAAATCTTCTGGACTGTAAATCAAATATGAGTTCTTTCCGCATTCGTTTAACATACAATCACACTAAAGGATTGAATGGGACTGAGAAATGTTCAG ACAACGATGAGCGTTCCAAGAGAAGAAAAACAGGTGAATCCAATTTAGTTGGAGAAAAGCCTTTTAGCAGTTCGGTAGAAAATGAATCCTCTGACTGGTG TGAATCCTTGCAAGAAATGGCAAATGAACCCTGTCATTTTACCTGCGTTTTCTGCAGAGAACCTTACTATTTTGGTGGAAGATACCTTAAGTATTCACGA AATGTGAGTCAGACACGCTGGATCATTGATGATGAGAGAATGGGTGAAGCATCAGTTGAGGAAATAATTGGCGGAAACATCCTCCAGGCATCCCGTGGTG ATAGTTTTAAGTTTCACGCTGCCGGCAGAGAAGATATCGATGTACGTATGCTGGGCCCAGGCAGGCCTTTCCTTGTTGAGGTGCAAAACGCACGACTTCT CCCGTCTGAACTGTTCGCCAAAGATATAGAGAAATTGATAAATAACGTGGAAAATAAATTGGTTAGGGTGAGAAATCTGAATCTCGTTGGTAGTCATGGC TGGAACCTTATGCGTGAAGGTGAAGCAGAGAAGCAGAAGCAATATGCTGCTCTAGTGTGGATTTCTCGCCCTTTGAAGGATGAAGATTTGCAACATATTT CTTCACTCAAGGATTTGGTTAGTCTTTATGTTGTGTACCAATTGTTGTCAAACTTGTATTTTTAAGAAAAAGGTATAGGCAAAATTACTATTACCACATG GTGCTAAAGATGATTCCGTTTTGTTTATTTTTTGGTAATACATCTTGATTGGAATTGTTTACCATGTAAGCCTGCTATTTATCCATTTTATACTTTTATA TGCATGTCCATTGAATCCATTCCTATGCTATGCTCATATTGGTCTGCCATTTTGTGTTGTTAGATGTGCTGACTGCTAGTCTGCTATGATATATAAATTA ATTATATAGAATAGTAAATTTTATTATAGAAAAAGTGGAGGTATCAACATGGAAGATTCAACTCGCTAATCCTTCCAAACAGAAATTATTCAGAAAAAAT TGTTGATTCAACTCGCTAATGCAAATTGTTGATTCAACTCACTAATGCAAATTGTTGGAGTGTAAGACCCATGTTGAAATCCATTGTTATGCATTAATTG TGGAGATATTGACTCACAAATGATATTTGATCACATATTCTTGATTCCTTTGAAGACATAATGTCGTTTGTGCAAGGTTTGACTCACCTAGTCACCCTGG TTCATGCTTATAAAATATTTTTGGGATAAACTTGATTTAGACTTCTTATGCATATAATAACTTTTCTCAAAATTTTGTAACTTTGGAAAGTGAAATTTTC TGTTTTTTGTGCAGAAAGTTTTGCAGAGAACCCCTATAAGGGTGCTACACCGTCGCAGTCCTTTGGAGCGTGAAAAGATTATCCACTGGATGAAAGTGGA GACAATTGCTGGAAGTTCGCAATATTTTCTTTTGCATCTATGTACACAGGCTGGGACCTACATCAAGGAATTTGTTCATGGGGATCTTGGTCGAACCCAA CCTAGCATTGGATCAATTTTGGACTGTAGAGCTGAAATTTTGCAACTTGATGTTACAGACATCAAAATGGACTGTTTCCTGGCCTAGTAAGGTTATCTCC TGTTTTCAGTATTTAGTTGATTGATTTTGGAATGAGCAGTGCTCAGATGAAAGACACTTGAGTATCTTCAACTTGAGCTTTGTTTATTTAGTATCTAAAA GATGTTCTCAGAATTAGTAACTTGAGCCTCTTATTAAGGTCTCTATGCACACTTGAGGAGTCCTGAAGAAGAACAAAAGCAGTCATAACTTTAATTTTAT TATAGTGATTGAGAATAGATTTTGATAGTGAAGCCTCAAGAATGGTTCTTAAGTTTTTCATGTCTCAAATGCAGACTTGCTTTTAAATGGTTAAGCCCTG TAGAGAACCTGCTGGAGTAAATTGATGCCTTTTAAACAGAAAATTGTTCACCCAAAAAATATAACAGTTCAAACACCAAAGGCTATACCCCCTTGAGATC GGGGTTAGTTAAAGGAACATGTGTGAAACCTTCAACTTAATTAATCAATTAAGTTGAAGGTTAAGGTTTCTAAGTCTCCTACTTGCAGAGGAGAAAATGA GGGTGGGGACAAATGGATATATAGACAAGAGGAAATTCAATAAACATGAAGTTGATAAATTTACATATATTGATATTAATATTATTGCAATCTTACAGTG CTCTT BLAST
Tissuepods
Gene nameLI_gene_139160; 
Additional informationdetails; 

Expression of Ll_transcript_401032

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_401032
BlastpPutative tRNA pseudouridine synthase Pus10 from Homo with 29.65% of identity
BlastxPutative tRNA pseudouridine synthase Pus10 from Mus with 29.21% of identity
EggnogResponsible for synthesis of pseudouridine from uracil- 54 and uracil-55 in the psi GC loop of transfer RNAs (By similarity)(COG1258)
KeggLink to kegg annotations (150962)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019449496.1)
Pfam-
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;