| Id Trinity | TRINITY_DN45240_c0_g1_i12 |
|---|---|
| Name Transcript | Ll_transcript_400652 |
| Sequence | GGTTTTGGAACTGCGAGGACAGAAGCTTGAGGTCAAGATTTTGAGCATTGCCGAACACGAGGAGGCTGATGAGTTTATAATTGGGATTCCGAAATCTTCT GATGGGAAGGAAACACCGCAATCAAACAAAGTCCGTAGTGTTGCAGGCAGGCTCGCTGTTCAAGCTGCTGAGAGAAGGTACTAAATGTCCAGAACCATGA TTTATGTCTTATGGGGTTGGAGAGTGTACCTACAGGATGAACATGGGACCACAACAGAAGCGTTAGATCGGATGATCAGATTGGGCCTAAGTAAATCCTC CCGGCAAGGGAAAATTGACGCGTATGCTGCGGTGATGGTACTGGAGAGATATTTCTCAACATCAGGTCGTGATACTGAACTTGTTTTGCCAAAAAGCTCG GAACTACAAGGGAAACTCCGAAGGGGTCCTCCGAAGGATTTAGATTTCTACTCAGATGAAGACTAATCACAGAGAAAATTCCTTTTGTCGTTAGCTTCCG CGGTGAATTCGAATAGTTGTGCCTGGTAATAACTGATTATTTAAGATGCAGCTTATTTGTACTCCTTCATCATTCTTGTTTACAAATAGTATGCAAAAAA AAAGTACAAGAGAAGCATATTCCAATAGTTAATGATCAAGGATTTTGTTTTTGCATCTCCCAAGGGAGGGTAGCATGGAGAGAATGGCTATTCACGGCAT TGAAGTTATTGTAAAGCAATATTTACAATAACATGGATACAGTGATTGTGTATAAATCTTTATATTGACAGTGCATAGATATTATACTCTATCTATTTAT TTATAATAGTACATATTATTCGGGTAGGTTGTTGTAAATCAACAGCATCTGAACTTGGTATGTTAAGAAAATGAGACTGCATATGGATAATGCTTGTGTA ACAAAACTAGTGCCAAAAATGTGAGAGGATGCTGTGGAGGACACTATTTCATACCCTATCAGCTATCTAATAGTTAGTCTGTAAAGGTTTTTGTACTTTT TGTGGCTAATAATTTTGTGGCAGTAGCATTAGTGATGG BLAST |
| Tissue | pods |
| Gene name | LI_gene_139200; |
| Additional information | - |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_400652
| Blastp | - |
|---|---|
| Blastx | Putative pre-16S rRNA nuclease from Shewanella with 28.32% of identity |
| Eggnog | Could be a nuclease that resolves Holliday junction intermediates in genetic recombination (By similarity)(COG0816) |
| Kegg | Link to kegg annotations (SO_3347) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019463335.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |