Ll_transcript_400642

Id TrinityTRINITY_DN45240_c0_g1_i3
Name TranscriptLl_transcript_400642
SequenceAACATTTTTTTTGCTTATAAGTGATATATTTTGTATGTTTAGCATGATGGAGTTTATGGCTGGATTACATGTTGCTGCAATTAGTAAGAAAATTTTGCAC TTGGCCGTGACAGAAATAGTTTAAGTTTGTTTCGGCAAGTGCAATGTTCTTTTAAATGACAAAATGGAATTTAAATTATGAACTATGTTATTTGTGTTCC ATCAGCCTCAACCATCAATCCCTATAATCTCGTAGTTGCTTTAGGTTTTGGAACTGCGAGGACAGAAGCTTGAGGTCAAGATTTTGAGCATTGCCGAACA CGAGGAGGCTGATGAGTTTATAATTGGGATTCCGAAATCTTCTGATGGGAAGGAAACACCGCAATCAAACAAAGTCCGTAGTGTTGCAGGCAGGCTCGCT GTTCAAGCTGCTGAGAGGGGTTGGAGAGTGTACCTACAGGATGAACATGGGACCACAACAGAAGCGTTAGATCGGATGATCAGATTGGGCCTAAGTAAAT CCTCCCGGCAAGGGAAAATTGACGCGTATGCTGCGGTGATGGTACTGGAGAGATATTTCTCAACATCAGGTCGTGATACTGAACTTGTTTTGCCAAAAAG CTCGGAACTACAAGGGAAACTCCGAAGGGGTCCTCCGAAGGATTTAGATTTCTACTCAGATGAAGACTAATCACAGAGAAAATTCCTTTTGTCGTTAGCT TCCGCGGTGAATTCGAATAGTTGTGCCTGGGAGGGTAGCATGGAGAGAATGGCTATTCACGGCATTGAAGTTATTGTAAAGCAATATTTACAATAACATG GATACAGTGATTGTGTATAAATCTTTATATTGACAGTGCATAGATATTATACTCTATCTATTTATTTATAATAGTACATATTATTCGGGTAGGTTGTTGT AAATCAACAGCATCTGAACTTGGTATGTTAAGAAAATGAGACTGCATATGGATAATGCTTGTGTAACAAAACTAGTGCCAAAAATGTGAGAGGATGCTGT GGAGGACACTATTTCATACCCTATCAGCTATCTAATAGTTAGTCTGTAAAGGTTTTTGTACTTTTTGTGGCTAATAATTTTGTGGCAGTAGCATTAGTGA TGG BLAST
Tissuepods
Gene nameLI_gene_139200; 
Additional information-

Expression of Ll_transcript_400642

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_400642
Blastp-
BlastxPutative pre-16S rRNA nuclease from Shewanella with 34.04% of identity
EggnogCould be a nuclease that resolves Holliday junction intermediates in genetic recombination (By similarity)(COG0816)
KeggLink to kegg annotations (SO_3347)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019463335.1)
Pfam-
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;