Ll_transcript_400960

• Id Trinity: TRINITY_DN45247_c0_g1_i9
• Name Transcript: Ll_transcript_400960
• Sequence: GAAAGAAGTAACCCTTTGGTATGAGGTGTTCTAAATTACTAACTCCTAACCTTTTGTATCCAAAAACATTTGGAGTGATTCAAAATAGAATTGGAGTGGG TAAATTCTCTTAACTCAAAATTGTATCTTCACATTGTTTGGTTAAGTTAGGGTTTTTCAGTTGATGAAGCAAGTGACGGCGTTGCAGTTGTTTCGTGATG TGGCCAATAAGCCCCGTTCTAGGCTCCTTGGTTTAGATGTTGGCGATAAATACGTTGGTCTCGCTCTTTCTGACTTCAATAATCAAATTGCTTCTCCTTT CAGTGTTCTTGTTAGGAAGAAGTCTAATATTGCTTTGATGGCTTCTGATTTTGAATGTCTCATATCTCAATATTCTTTGAAGGGCTTTGTTATTGGTATC CCTTTTGATAGACATCGTGTTTCGGCTGATGCTGTGCAAGTCAAGGCCTTCATTAATGACCTCTCTAGTACTAAAAAGCTGCAAGGTATACCATATACAT ATTGGAATGAGCGCTTCACTTCTAAGAACGTGGAGTTGTTTTTAAAGCCTCTGGACTTGTATCATCCCTATCATTCCAAGACTATGCTAGACAAGTTTGC TGCTGTAGGAATACTTCAGGGGTACCTGGATTATGCTAACAGAAAGGTAGAGAGGCATTCTCCAGAAATCACATATACAAACCTGAGGACAAAAAAAACA AAGGCTTGAGGTT
• Tissue: pods
• Gene name: LI_gene_139212;
• Additional information: details;

Expression of Ll_transcript_400960

FPKM

• PAB: 3.7
• PNAB: 4.2
• PS1: 3
• PS2: 2.8
• PS3: 3.1
• PW1: 2.8
• PW2: 3.4
• PW3: 1.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_400960

• Blastp: Putative pre-16S rRNA nuclease from Beijerinckia with 36.11% of identity
• Blastx: Putative pre-16S rRNA nuclease from Beijerinckia with 36.11% of identity
• Eggnog: Could be a nuclease that resolves Holliday junction intermediates in genetic recombination (By similarity)(COG0816)
• Kegg: Link to kegg annotations (Bind_1895)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019420916.1)
• Pfam: Holliday junction resolvase (PF03652.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;