Ll_transcript_400579

• Id Trinity: TRINITY_DN45276_c0_g3_i2
• Name Transcript: Ll_transcript_400579
• Sequence: AATAAATTTATGAAGCAAAACATTATTTTGGAGACAAAAAATTAAAAGTTGAAAATGTCGGAATTACCCTCATGAATGTTTTGGGCGTGTTAAAATGGCG ATCGCGTGGTGCAAGGAGATCTGAAGCACTGAAATCTTTCCGCTTCTGATCTGAGTTCTGAGTTCTGAGTGTTTGTGATTTTTTTGGAATTTGCACAGTG AAATCAATGGCGGGGTCTGGGAGTTCCATGCTGTATTCAATTCTTCTATTCATAGTTATTCTCTCGCTACAAGAAGTGTACCGTGGAAAATTAGCATCGT CAGAATTATATACTATACTTGGAGGCTTCACCAGTTCTCTCTTATTTCTCGTGCTTCTAACCTTCATTGGAAATTTTCAGGAATCAACTGGTGCAAAAAC AGGTTGGGGTGCTGTCATAGTAGCAGAAGCAGTTGCTCTGATTGCTGCTAGCACCGTCCACCGAGTTTGCATTACTACTTGTTTCCTGTTTTCGGCTGGA TTGCTGTATGAGGTTAACAAGATCTCTGTGTCAGCCCTTTCAACAACTGAATCCAGAACCAAAAAGCAGGGTGGGAGAGCTTAATCTTATGTGTTTTTTT CTATCATGCATCTTTCTGAGAATTTTCCTTAGTGATTTTAGTTTTACAGACCCTGGTATCATAACCTATAAGAAGAGTATTTAAATTACCTGCTTTTTAT TTTACAATTATCACAGTGATATTATTTGAACGGTGTGCAAATTAACAAACTAAAAAGTCAATTTTCTCTAGCTCTTGTTTAGTTCATCAAATAATGAATG TTACAATGGACTCCAATTACAAATCTACATTGGTTATAATGCCTCTCCAGCTTTCATATAAA
• Tissue: pods
• Gene name: LI_gene_139275;
• Additional information: details;

Expression of Ll_transcript_400579

FPKM

• PAB: 5.6
• PNAB: 3.5
• PS1: 3.9
• PS2: 5.5
• PS3: 3.5
• PW1: 2.1
• PW2: 4.6
• PW3: 1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_400579

• Blastp: Protein KRTCAP2 homolog from Ixodes with 37.61% of identity
• Blastx: -
• Eggnog: Keratinocyte associated protein 2(ENOG4111ZNW)
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019415942.1)
• Pfam: Keratinocyte-associated protein 2 (PF09775.8)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;