| Id Trinity | TRINITY_DN45303_c0_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_323804 |
| Sequence | ATGGCGGACACAGCTAAGACAGCCAAGCCCCCTAAGGCTAAGGGCCTGCCCGCCGTCCCCGAGACTGTTTTGAAGCGCAGGAAGCGCCGCGATGAGGCCG CTATCTCCCGTCAGAAGGCCGTCTTGGCTCTTAAGGCTAAGCGCCTCACCACCAGGAAAGTCATTTTCAAGCGTGCTGAGGTCTACCAGAGGGAGTACTT GGCTAAGGAGCGTGATGAAATCCGCCTGAGGAGGGAAGCTTCCAAGGCTGGTGACTATTATGTTCCTTCTGAGGCCAAGCTTGCATTTGTCATTCGTATT CGGGGTGTTAACAAAGTTGCCCCCAAGGTCAGGAAGGTTCTCCAGCTCTTCCGACTGAGACAGATCAACAATGGAGTGTTCATCAAGCTCAACAAGGCCA CTGTCAACATGCTGAGAATCTGTGAACCCTACATTACCTGGGGCTACCCTAACTTGAAGAGTGTGAGGGAGCTTATCTACAAGCGTGGATTTGGCAAGGA TAATGGTCAGCGCATTCCTATCACTTCAAACGATGTTATTGAGAAAGTCTTGAAATCTAAGGATATCCTCTGTATGGAAGATCTTATTCACGAAATCTTC ACTGTTGGTAAACAGTTCAAGTATGCCTCCAATTTCCTGTGGCCCTTCAAGTTGAACACTCCTACTGGTGGATGGAGAAGGAAGAACAACCACTTTGTTG AGGGTGGTGACTTTGGTAACAGGGAAGACCAGATCAATGCTCTGCTGAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_139333; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_323804
| Blastp | 60S ribosomal protein L7 from Sophophora with 68.7% of identity |
|---|---|
| Blastx | 60S ribosomal protein L7 from Sophophora with 72.9% of identity |
| Eggnog | ribosomal large subunit biogenesis(COG1841) |
| Kegg | Link to kegg annotations (Dmel_CG4897) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_020235661.1) |
| Pfam | Ribosomal L30 N-terminal domain (PF08079.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |