| Id Trinity | TRINITY_DN45325_c0_g1_i8 |
|---|---|
| Name Transcript | Ll_transcript_324257 |
| Sequence | GAAAAAGTGAATAGATATTAGATAGGGTTTGGGCGAGTCTATAGTTTTCTACTACTATTCCCTTTCCTCATTTTCCCGCCGTTTCTCTCTCTCAAATTTA CCATTTTCCCGCCGCACCGATCCATCGCCGCCGCCGTCACAACCACCGTAACACACTGACACCGACACCGAAACGCTGCGTTTAAGAGAAGACAATGAGT GCTTCTACTAGAAAGAAGGTTCAGAGAAAGAGCAAGATCAGAGGCTACAATCTCAAAGTTGATGCTCTCGATGAGATCCTCTCCTTCGTTTCTCGTTTCC CTAATTCAGATCATGATGAAGCAATTGATCTTCTCCTCGATCAACTCGATCACGAATCTCTGAAATCTACTATAGTGGACAAGGAGCTAGTGCAGCGTTT AGTTAGTCTGTTATGGGAAACCGATGAAGCGGTCGGTGAAACATCGGTTTCATTCGGTTCTAGTTCTCGTTCCTCCATTTGTGTCGTTGATGCCTTCGAC ATTCCAAGATTTCACTATGACCCTATCAGAAAGCAATTCTATGAGCACACAAGCAGCTTACCTGTTCATGGAGAAGCATCAGCAAAAGAATCTTTGTACA GGGATAGGTTTCTTTTGTTATCCCAGAGGCTCTCTCGTGACCAGCATTTTTCAAAGCCTGCTTTTGATTCTGAATTTTCACACTTTGGGAGTTGTGAGAT ATCTCCTATTCAATCTCTTGTGGGGCAAACAGGTAGAAGATGGGTAATGGGATTAATATCCCAGCTAGAAGATGGGCATTTTTATTTGGAAGACCTTACT GCTTCAGTTGAAATCAATTTATCTAATGCTATATCCTTTTGTCTCTTGACAATAATTATTTTGTTATTTTATGTGTTGCAAGAGCTCTACAATCTTATTA AAGGTTTTAATTAGTTTTACTTGAGGATAAAACAATAATGAAAGGAGAGTTCAAATTGGGTTTGCCTTCAGTAAGTTTATTTATTTTAGTGACAATTTTT TTGTCTGGGCTGTACTAATTCAGTGTCTGGATGTTCACTTGCAACTTGTTTTCCCAGTAAGCTGCCTTGCATGCCATGTTTTGGCTTCTTCCAGTGGATT AGTTTTCTGCTCTAAAATCTATCTATAATTATTATTGTACACTTTTCAGATTCGACCACCGGTTTGATGCTGCACAACTATATTCAAATACTAAAAAAAA AAGATGAAAATATATTACTCATTAACCTTAGGATCATTTCGTCCATGATGGGCTTACTTGAGATTTGACCATGTGCATAACTTGTCCATGTGGTTTTTAG ATTTTAATTTTTTAATATTCCACTCATATTATGGTGAACAATAACATCAGCCATCTTGAGTAGATCGAAATTAATAATAGTTTGGTTAAGATTATTAGAT ATATCTAAGTGATTGAAGGATTTCGGTACAAAGTGCTTGAGATGCATTTGCTCTATCTTCATACTTTTTATACTATAACTCTTACATTTCAAATATCATA TTAGCATGGATATATTTCATCGGTTTCTTTGACTAGCAATACAAGATAACTACAGGATTCTTTTCAGAGAACACCATAGTTGTGGCCGAAGGCGAGATGC TTGTAGAGGGTATTTTTCAGGTTTTAACATGTGGATTTCCCCCATTGGAGGATAGAGATAAGTCACTTAAACAACTTTCAGGGCAGGACTTTTTTGGTGG TGGTACTTTCACGATAGAAGAAACTATTAAACTGGAAGAGATGGAAAGAAGAGCAGTGAATGACATGTTTGTTATTCTATCCGATATTTGGGTAGACAAT GAAGAAGCTATGGGAAAGCTAGAAACTGTTTTGGATGGCTTTGAGAGTGTGGAAGTGGTTCCTTCCTTATTTGTTTTCATGGGAAATTTCTCTTCTCACC CATGTAACCTTTCTTTTCATACTTATTCGACCCTTAGGTTGCAGTTTGGCAAGCTGGGGCAAATTATTGCTGCCCATTCACGGCTAATAGAGCACAGTCG ATTTCTGTTTATTCCAGGTCCTGATGATGCAGGTCCTTCAACATCTCTTCCTAGGTGTGCTCTACCAAAATATTTAACTGAGGAGCTCCAAAAGCATATT CCGAATGCCATATTTTCAAGTAATCCCTGCAGGGTCAAGTTTTATAGCCAAGAAATTGTATTTTTCCGACAAGATATGCTTTATAGAATGCGCCGTTCTT GTTTAATGCCACCTTCTGAGGAAGAAACTGATGATCCTTTTCAGCATCTTGTTGCTACAATAACCCATCAGAGTCATCTCTGTCCACTACCTCTAACTGT GCAACCCATCATCTGGACTTATGATCACTGCCTCTATCTTTATCCAACTCCACACACGATAGTCTTGGGAGATAGTAGTCAACAGAAGGCATTCAAGTAC ACAGGAATCACTTGTTTCAATACTGGTTCCTTCTCAATTGACAGCACCTTTGTTGTGTACCGTCCTTGCTCTCAGGAAGTTGAATTATCAGCCTTGTAAG AACTTCAGAATGAATTCACTTGGTTTGTTATCCTCTAACCATAAGCTTATCAGGCCTATTAGCTTTGGTGCTCTTTATTTGATATACATACCAATGAACA TGAAATTTGTGATTCATTTCTTTTTCTCTCTTGGGAGGGTCAGAATGTTGAGTATTTTTGTATTATATGCTTAATGCTTTGTAAACAAGTGATTATTGTT TTATAGTAGAATCTGTAAGTCTAGTTGAGAATATTTATTTTTTAAAGTTATGAGGCAGTTTCTTGTTTATTGGGTAAAATTTGTAAGCGTGTACTACACA AAATGTTCCTTTTCTTTGATAAGTTATTACTGAGCCACATTAAGTAAAAACCCG BLAST |
| Tissue | pods |
| Gene name | LI_gene_139385; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_324257
| Blastp | DNA polymerase epsilon subunit B from Arabidopsis with 78.67% of identity |
|---|---|
| Blastx | DNA polymerase epsilon subunit B from Arabidopsis with 78.44% of identity |
| Eggnog | DNA polymerase epsilon subunit(ENOG410XP7N) |
| Kegg | Link to kegg annotations (AT5G22110) |
| CantataDB | Link to cantataDB annotations (CNT0002418) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019436766.1) |
| Pfam | DNA polymerase alpha/epsilon subunit B (PF04042.15) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |