Id Trinity | TRINITY_DN45327_c0_g1_i4 |
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Name Transcript | Ll_transcript_324030 |
Sequence | TGGACTTTAAATGTTTTGCAATTATTTCATTGAATTTGTGTTGCATGTACACTTGCATAAGAATGAATCTTGTATAGGTGCCATGCTTATTAATACATCT AATGAAATATTTCCACATCATTTAAAAAAAAATTAGTTAAAAATATTTGAAGGGGATGCTTAGGGTACCGGTTAAAGAAATAGAAATGTTATTTTTGTTT TGGGAAATGATAGATTTAGTACATGAAGAACTGGTGGACTTGGACGATACCGACTTTCCCTCATTGCATTTTGGGTACTGGTTAAAGTTACTCTTATTTT AATGTTATCTAAGATTTTGATTGTGGCCTTGTATCCCTTGTCCTTTACTTCATTGTAGGTCACTTTAAGCATACTTAAAAGTGATTATTTTGGTAAAATC ACTTTGGCACTTAGACATTTGCTCGGTTGGGATTTTACAAACAGCACAAGCTGAGGAAAAGTTGAACCTTCCCCTAACTGTGCCCTAATTGAATCTCACA ATCTAGCTTCAACCTCTGTGTGGTGTAAAGAATGTCAAACAAATGCCATAAGAGTAGTGATTAAAATGAAGAATCTCTGGAAAAGTTTTATGCTTCATTT CCACTGAGTATGGGTCATTCAAGTCATATCCGTGTTTTGCATATTTCCGCCAACATCTCAGTACTACTTCAACTTACAATATATTTGAATAAGAAAAATG TTTAATTCCACAGCCAACCACTTTTTAAACTTATTATAGGCATGTTTATGTTTAGTAAATGTTTAATTTCATTGTCAAACACTTTTAAACTTGTGCACAT ACATTTTGGGTGTTTAGATAATTTGCTTGCATGTTTGTTCCTTGTCTATGTCATGACCATTCTTCATATGAACTTTATTCTGATTAGATTCGATCCTACT TCCAGAGAGTGCTCTAGAAAAATGCTATTTGTAGCCATATCATTAGTAAGAAAAGTATATACTATTAGCCATGTCATTTTCTACTATAAAGAAATTCATT GTACATCCTTAGAGTGTAATGTTTTATCAACCATAGATTTCTTCCCTTTGAGCTTCTGTAGGATAGACCACTAGAGAATCTTACCCTTTTCATGTTAATC TTTGTTTCTTCTAGTTTGATCTTTGGGATGTTTTTATTTTATTTTTCATTATACTATAAAGGAAAGTTTGATCTTACAGGAATCATGCCCACTAGAGATT CGGATCCTACTTACATGGGCATGATTCCTATAAGATGTTGTGGCTCCTAAAACCGAATAAGAGATGTAATTTGCTGCTAAAACATCTTACTTTCCTGAAA ATTTAACATACAATAAACATATGCATGCTATATTAAATCTGGAAATTCATAAAGTTGTTATTCCCTATAGAGACAGGATTCATCTCTTGGAGGGGTGCAC ATTATGTTCAATATATCTCCAATATGTTGATTTTCCAGCAAGCATTTGGAGGAAATATGAGTTTATGCAGTTTGATGTCCTCAAATAATAATTCTTATGA ACATTGCACTTGGGATGATATCAAGCTCCACCACATTAATTTATCTTCCTAAGATCTTATGCCAGATATCTTTACTATTTGTATCTTCCATCTCTGATAT TGATATATTTCTTTTTTATGCTCCAATTTCGTTCTATACTCAAGTTTAAAAAGTTTTTATTTTATGAAATGTATCTTTCTTCTGTATGTTAGCTCTCTTA CCTTGATTAATATTCATGCTTATGTCTATGTTTACATTAAAATGAAAATAAAATTTCATGTGTCTGTGTATCTCTTTCAGAACTATCTTTTAATTCACTT TTTTCTTTTTAATAAGGTATGCGTGCGGGATTACCGAAATATGTTCATGTAAATCTGAGGGACATAGAACCTAGATTTCAGGATGGAGAAGAGGTATCTC TAGAGACACTGAAGGAGAAGCGTATTATTAACCCATCAGGAAGAGATAGGAAACTTCCTTTGAAGATTTTGGGCCATGGAGAACTAACCAAGAAGTTGAC AATTAAAGCACGTGCCTATTCGGCATCAGCAAAGGAGAAACTTGAGACTCTTGGCTGTTCCCTCACTGTGCTTCCTGGACGTAAGAAATGGGTTAAGCCA TCAGTTGCTAAGAACCTTGCACGTGCTGATGAATACTTCGCCAAGAAGCGAGCCGCTGCAGCGGCTTCTGAACAAGCCTCAGCATGAAGTTAATCCACTT TTGTATACTGTGTAGTCACATTTAGAAGTCTTCAAGAGAGGTGCAAAGTGATCTCTTAGAAACCACCTCACTTATTTGAAGTCTTCAGATATCTCTCTGG TTCTTTTAGTTATTATGTTATTTCAATTAAAGGCAGTGATTCTTTGTTCTTTTTGCATTCTAATGTTACTTATTGAACTTTATTCATTCATCACCTAAAC ATTCTTCAAAGTAAAAATAAATTAAAAAAATGTAAATTTTTGTTTGCCAGTTTTTGCATGAGGCATGTGGTAGTAGCGTTCAGTTCTATAATAAGGTGGT TTTCATCAAGTAGTTGTAATTATTGATTAAGACATTTTGTCGTTTCTTGTTCAAGTAGATGCTGCATGCGTTAGGAAGAGC BLAST |
Tissue | pods |
Gene name | LI_gene_139390; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_324030
Blastp | 50S ribosomal protein L15, chloroplastic from Pisum with 80.17% of identity |
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Blastx | 50S ribosomal protein L15, chloroplastic from Pisum with 83.19% of identity |
Eggnog | - |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019428276.1) |
Pfam | Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (PF00828.18) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |