| Id Trinity | TRINITY_DN45359_c0_g3_i4 |
|---|---|
| Name Transcript | Ll_transcript_324011 |
| Sequence | CTCTTTTCTCTCACTTTTCAGTTTCAATTTCAAAGTTGATAGGTAAAAGCTGCTGCGACACAGTTTCAATTCAATAACAGAGAGTTCCAATGGAAATAGA ACAAGAGAATGGGAATATCCATCATGATTATAATCATCACCAAGAGAATGAGAATGAGAGAGTTAATGGATGTTTAAGCAGTTTCATTGATGATGGAAGC ATAGAGAGTCACAGATATTACTTGTCTAGAAGAACTGCATTGGAGATGTTGAAAGACAGAGGCTATTCTGTTCCATCTTCTGAGATCGAAATCTCTCTCT CTGAATTCAGAGCCATTCATGGTCACAACCCTGACGTTGAACGACTCCGCTTTTCAGCCACTCATCAATCTAACCCTTCCAAGAGGATTTTAGTCATTTT CTGTGGGCCAGGTGTTGTCAAAGTTAATGTGATCAGGAACATTGCTGGACAGATTGTTAACAGAGAGACTTTAACTGGACTCATACTGGTAGTGCAGAAT CAAATTACTGCCCAGGCCTTGAAAGCAGTGAAGATTTTCTCATTCAAGGTTGAAATATTCCAGATCACAGACTTGCTTGTTAATATCACGAAGCATGTAT TGAAGCCAAAGCATGAGGTGCTGACTGAACAGCAGAAACAAAGTCTCCTGAAGAAGTACAGTTTAGAAGAAAAGCAGGTCAGTTGATATAACTTGGGTGA TGCAAGTAGTTATCATAGGCACACCAGCCATGATTCACTCTGGAAATCCGTAATGCTATCAAGCCGAAAAGTATATGGAAGCATACTAGTTAAACTTGTG TGCTTAAGATTTTGTTGCTTTCATTTATCTCTGGTCGATTATTGAATTAGATCTTACAATAGCCATATGAAATGCTGATATTTTGTTGCTATTTTGTTAT CATGTATGCACATATTGAAAAAAGCTCCTCTGAAGTGAGCTTCTTTATAAAGTGGAAAAGTGAGGGTGTATCTGCCCTTGGATGATTTAGTGAGCTGAGA TCTCGATGCGCTATATCAAATTAAGGACGGCTTCCCCGCATGCTACAGACAGACGCGATCACGAAATACTATGGACTGGAGAGGGGGCAAGTTGTTAAAG TTACCTACAATGGTGAAGTCACTCAATTGCATGTCACATATCGATGTGTTTGGTGATGCTTTTGTGTGCTTTTTCTTGTATTATGCGAGTTGAATTCGTA GATCACAATTATTTATCACACTTGAGAAGTTTATGAACAATTTTTAAGCCCCGGGTACCGGTCCTAATGTTCAGAACTCTATATATTTAGGGTTGTGGAT GGCTTTCTCTTGGACCCATGGAGAATAAGTCCACACTGCATAGTTCTATTTGCAGACCTTTTTAACAAACTACACTACTTGCAAATGTGGCTACCTCTAT GTTGAAAATGACTCTTTTATTTTTCAAACAATATTTGGTGTAGCCATTCTAGAAGTTTATGCTATAAACTCGATATGGGCCAATTCCATTGGAGATCTAT GGTGAAAAGAATGGGCATTAAAGCTACACAGTGTGACGAGTAACTTTGTTTTAGTGACAACTAAGGGTGTAAAATTTTAGTTTGGTTTGGTTTTTGGTAC AATTTATTGACTGAACATCAAGATATAATTCGATTCATTTTAATâBLAST |
| Tissue | pods |
| Gene name | LI_gene_139473; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_324011
| Blastp | DNA-directed RNA polymerase V subunit 5A from Arabidopsis with 58.82% of identity |
|---|---|
| Blastx | DNA-directed RNA polymerase V subunit 5A from Arabidopsis with 57.3% of identity |
| Eggnog | DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates(COG2012) |
| Kegg | Link to kegg annotations (AT3G57080) |
| CantataDB | Link to cantataDB annotations (CNT0001929) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019437055.1) |
| Pfam | RNA polymerase Rpb5, N-terminal domain (PF03871.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |