Ll_transcript_324120

• Id Trinity: TRINITY_DN45369_c0_g1_i3
• Name Transcript: Ll_transcript_324120
• Sequence: AAAAATCTAAAACTTCGTGTGACTGTGCTTTGATGCTGGATTGTGTCCTCTTCTTCCCTCACCTTCTTCCTACCTTTGCTAGTCACAAATTCATTGTTTT GTTTTTTGACTTTTCCTTCTTCATCTTTCATAATTTCTTTCCTTTCATTTTCCATCCAATTATATCATTTCTCTGGTCCCTCCATCAAATAGTACTAGTT ATTAACTATCCAATCCATCACCACAATTTCATCCCAGATATTTTCCCTTTCCCAAACAGACACAAATAGTAACAATACCTCATCCTTTTCCTTTTTCTTT TCTCATCTCAAATCTTCACTTTTTTTCCTTCCACATAACACTTCTTCAATTATTATACTCCTTAATTCTCTACTACTTGCTTCTTTGTGCTAATTCTGTG TTTTTCTAAAGCTGGTATTTTTACTTTAAAAAGAAAAGAAAGCATCAAATACCACATGGGATTGGGAATAACCCCAACAACGAGAAATTTCATTCAGGCT TCAACTTCTGCTCAACTAGTATATAACAACAACAGCATCAACTACAACAAAGAAGATGGAATTGGGATCGTGTGTGAAAGAGAATTCCTTCAACGATCAT TACTCTGTTTACGCAGGCGAGGCGCTCGACGAATTGCCTGATAGCTTTACCATCACTGACCCTTCAATCCCAGGCCACCCCATCATATTTGCTAGCCTGG GATTCCTGAATATGACAGGGTATACTAGGGAGGAGGTTGTTGGAAACAGCGGCGCCATGTTTCAGGGTTCAGGGACTTGTAGAAGAGCGGTTATGGAGAT TCGAGAGGCGATAAGGGAAGAGAGGAAGACTCAGGTTGTTCTGTTGAATTATAGGAAGGATGGGACACCCTTTTGGATGTTGTTTCATATGAGCCCTGTT TTTACGGAACACTATGGCGGGGTGGTTCATTTTGTGGCAGTTCAGGTTCCCTTGCAGAAGAAAATGAATTTTTACGAAGATGGGTCGAGGCTGCAGCAGG ATTTTGTGTTTGGGTATTGTAGGAAGGAAGTTTGCTTGGACTCTGTGTTGGGACTTGGTCGTGTTTGTCCTATGGATCAACATGATGATGTTAGAGACTT AGAGAGTGAAGAGCCCTGCGATGCAAGTGACGATGAGAAAAGAAGCGCTGTGACGGCTATGGATAACATATTTTCTATACTTACCCACTACAGTGAGTCA ACGGGCAAATTGGTGTGTAGAAAGAGATGCAGCATGCCTGATGTGGGTCTTCTTAGTACATCCTTGATTATTTCCCTTGGTAGAATCAATCAAAGCTTTG TATTAACTAATCCACATTTACTTGACATGCCTATTGTGTACGCCAGTGATGCTTTCTTGAAATTGACAGGTTGTATAACCTTTACCTCTTGTAAATTAAG AACATAGCCTCATGATCATTAATTTAAATATTCTGACAACTGATGTAATGATATAAAACCAATTACTTTGATTAATATTTTCAATTTATGTTAATGTTTT CACTTAACTTGAATAGGTTATGCAAGAGATGAGGTGTTGGGCTGCAACTGTAGATTTTTGAGTGGAAAAAATACTGATACCTCAACTTTATATCTGGTAA TACACTTCAATTGCCTTAGTTCTTTAATATTTCTCGTTATTTTTGCAACCTAGATTAGTGGAAATGGACCCCATGGTTATGTCTCTTTCTTGTTGCTTGC AGATCAGGGAAAGCATTAAAACTGAACAACCGTGCACAGTACGTATTCTGAATTACAGGTTGATACTTTCCTTCATTTTTGCCTACGGTTTCAAAGCTGT GAACTTTATTTATTGGGTGTGCTGAATCAATTTATTGCAACACTAACAGGAAGGATAAAAGCTCATTTTGGAATCTTCTCCACATCTCACCAGTTCGTGA TGCTTCTGGCAAGGTAAACCTTGCACATGAGCTTTATCAGCTGGAATATAAATCTTAAATATGCCTGTTTTCCATTTTCTGCCAGTTATTTGTTTTTTCT CATTCTAATCAAACATAAAGAATATTAAAATAGCAAAACTTGAAATGGTCTTGATTGCATTTTCATGGTAATTACATGACTGCTGTCTGCTACTATTTTG GCCTGCTAGCTGCTTTGGACAATAGAATAGGCATGAACTGCTAGAACAATAGAATTTCTTATAGACGAAACCCTCTTCCTAGATTTATGTCAATGGTGAT AAT
• Tissue: pods
• Gene name: LI_gene_139496;
• Additional information: details;

Expression of Ll_transcript_324120

FPKM

• PAB: 0
• PNAB: 0
• PS1: 0.2
• PS2: 0.3
• PS3: 0
• PW1: 0.1
• PW2: 0.1
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_324120

• Blastp: Protein TWIN LOV 1 from Arabidopsis with 57.99% of identity
• Blastx: Protein TWIN LOV 1 from Arabidopsis with 50.73% of identity
• Eggnog: Histidine kinase(COG2202)
• Kegg: Link to kegg annotations (AT2G02710)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019434580.1)
• Pfam: PAS domain (PF13426.6)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;