Ll_transcript_323926

• Id Trinity: TRINITY_DN45384_c0_g2_i2
• Name Transcript: Ll_transcript_323926
• Sequence: CTTCTCACTTGACTCTACATAGTATTTTCCGTAGAGTTCTTAACAATGAAATCAACTCTATCTTCTTTCATTGGCCTTCGTTCAGCATCATCATGGTTCG AATTATATGCTGCCTTCTCCACATTCATGATGATTCTAAGAACAGCCATCAATGATCTCATACCATCACAAGTTCGATCCTTCATCACAACAAAGCTAGA ATCTTTCTTCTCCAATATTTACCAATCAACTAACACTGCATCTCTCACAATTAACCGAATTTGGGACGAAAGTTCGAGAAATAACGAACTTTATCAGGCT GCGTGCAACTACCTTCCCTCGAGAGTAAGTCAAAGTTACAAGTCGCTCAAAATTGGGAAACTAGATGACTGTAAAGATCTGATGTTCGCAGTGGATGCAA CAGAAGAAGTGGTAGATGAATTTGAAGGCATCAAGTTCACTTGGATGCTAGATGAAGGTTCTTCTGAAAAGGAACGTAGAGATTTAGACAAGCTGGCTTT CAAGTTAAGGTTCAATGAGAAACATAGAAAAATAGCAATGGAAAAGTACATACCCCATGTACAAAAAACATACGAGGACTTCAAATCTGAACGAAAGATT CTTAAACTGAACTCATGGTCAAATGGGTATTGGGGAGAGAATGAGTTATCACATCCTGCAACATTTGGAACACTTGGCTTGGACCCAGAATTGAAGCAGA GAATTATTGATGATTTGGAACGGTTCTTGAAGAGGAAGGAAATGTATAAGAGAGTGGGTAAGCCATGGAAACGTGGCTACTTATTATATGGTCCTCCAGG AACCGGAAAATCAAGCTTAATTGCAGCTATGGCGAACTATTTGAAATTTGATGTGTATGATTTAGATTTGAATTCTGTTTATTCTAACTCGGATCTTATG AGTGCAATGCGGAGTACAACAAGATGTTCAATTATTGTAATTGAAGATATAGATTGCAACAAAGAGGTGAATGCTCGATCACTAAGGGATGAGGAGAATT CATATTGTGATTATAGCCAAGATGCCAAGGTTGAAGATGTTAAGGTTTGTTTCTGACTTTTCGCTTTTTGATGACAGAAATTTGTGTCCCATATCTAGTT TAAAATTAATCTCATAGACTAATATTTATATGAGTTGTGGTGTAATATTTATACGAGCTGGGATCATCTTCTCTCCTGGACAGTCCACTGCAGCAATGTG AACCCCAAATTAATACAATGATTTAAAAAATTCTTTTAATTAAATAAAACTGAGAATCTGAACCATTAAAAAAATTAAATATCATTTGTCATCATCTCAT CCAATACTAGACTCTACAATACAGGAGAAGATCATTTATTAGGATATATCTTGAAATAGGCTGAAAAATTAGATGTTCAATAAGATTTGTTAGGGGTGAT ATTCAAATCCTTCAAAAAAAAAGATTTGTTCATTTTCCATAGGATAAATACCTCTGTATGCATAAAAATATTTTAATTTAGAGCTTTTATGTATAAACAT TTTTAATTTGTTTTTTATGTGAAGTTATTATATAACTAAAAGTATTCTCTTTAGCATATAATTAAGAAATTAATTTTTTTTAGTACATAGTTCCCCTTCC GAAATATAATGTAATTTAACTTCAACAATTGGTATTGTTATAACAATAAACAACCAAAAACCAAAATGAAATATAATTGCACATCTAAGATTGAGTTGAA ACCTAATCATTGATATGATTTCATTCAAAATTACAGGTTGAAAGGTTTACTCTCTCTGGTCTACTTAATTGCGTAGATGGCTTATGGTCAAGCCACGGAG AGGAGCGAATTATAATATTTACAACAAACCATGTAGAAAAAATTGACCCAGCATTGTTACGCCCTGGTCGAATGGACATGCACATTAACTTATCCTTCCT TAAAGCCAAGGCATTCAGAATCTTAGCCTCTAATTATTTTGACATTAGAGACAAGCATCCTCTGTTTGAACAAATTGAAGAGTTGTTGGAGAAAACAGAG TGCACCCCTGCAGAAGTGGCAGAGCAGCTGATGAGAAATGAAGATCCAGATATTGCTTTTGAAACACTGTTGAAATTTCTATTTGAGGTTGACATGAAGA GGGAAGTGAAAAAAGGCAGTGAGAGTCGTAATAATAATAGTGAAAATTGACTGTATGAAACAATTTGTGGAATAAATGAAACAATGACAATTTGTCCATG TACAATCCTTTTCATTTGGCAATTATGAATTATTTAAGAGTTAATAACACCCGTCCCCTTGAGTTTTAGTGTAATTACACAAATCAACCCTCCATTTTTT AAAAGTTTACATAAACC
• Tissue: pods
• Gene name: LI_gene_139538;
• Additional information: details;

Expression of Ll_transcript_323926

FPKM

• PAB: 5.7
• PNAB: 2.5
• PS1: 6.4
• PS2: 0.4
• PS3: 0.9
• PW1: 4.5
• PW2: 4.2
• PW3: 3.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_323926

• Blastp: AAA-ATPase At2g18193 from Arabidopsis with 43.41% of identity
• Blastx: AAA-ATPase At2g18193 from Arabidopsis with 43.41% of identity
• Eggnog: Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins (By similarity)(COG0465)
• Kegg: Link to kegg annotations (AT2G18193)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019419047.1)
• Pfam: Domain associated at C-terminal with AAA (PF14363.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;