Ll_transcript_324442

• Id Trinity: TRINITY_DN45397_c0_g1_i11
• Name Transcript: Ll_transcript_324442
• Sequence: GATCAAGCGGTGGAGAGTAATTGAGTAAATCACGTGGTCCATATTGAACTGGTTGAATTGCCCAAGGAGAAATATTTTTACCATAGTCAAATGAGTCATT CAATATCTCATTTACTTTACTCTTTAGTTCTGCTGAGTTATTTCCACTTCCCTTCTCTATGCTATTATCTTCCAAGAGCATTGTCCCCTTCTCTTTGTTT ACCTTATTTTGTTGATACCCGTTGGCCAAGGAGCTCATCCGCTCCCTTTGTTTTTCTGCACTTCGGTGCACCACCAAAAGCATAGGCCATGTCGTCCTTT GATCTTCCACGAAACTCCATGAATGAGGATGGTGTTTCCAACAAAGTCTCCCATTTCGCACAATGTGCTTCGTTGGTGGTTGTTGCGGTGGGTACCATTC TCGGTCCACTGGATGTTGGTGGGGGTTGGTCAAAGGAAACCAATGGTTCTGTTTCAGTGGAGCACAAATCCTGAGGGATATCCACTAACTGCTTCAACGG ATCACCATAGAATCGTCTCAACAAGGAGACGTGAAAAACTAGGTGCAAACGAGTTGTACTTGGAAGAGCTAGTTGATACGCCACCTGTCGGCGGGTGACT TAGAACGGTCCATAAAACCTTCAGCCCAACTTCTGAGAACGTCGTCGAGCAACTGAGTTCTGGCGATACGGTTGCAATCGCAGTAACACCCACTCACCGG TTTCAAAGGGTGTCACTGATGAGTGGACGAGAGGTGGATTCGGCAAGGAAATCCTTGACTGTTGGTGGAGCACGGCCATAAAGTGCCTCAAAAGGAGACA TGTTGAGAGAAGAGTGGAGATTGGTGTTATATCAGTACTCTGCCGAAGCAAGGTGAGCACACCATTTTGTTAGGTTAGAACCTGTGAAACAACGTAGGTA GGTTTGGAGACCTCTGTTCATGACCTCAGTTTGTCCATCAGACTGAGGGTGATAAGTTGTGCTATAGCACACAACATGGTGCCAAGGAGTTTGAATAGCT CTTTCAAAAATTTACTCACAAATATTTTGTCGCGATATGAAATTATACTCTTTGGAACCCCATGGAGTTTGCAGATTTCATTCAGGAAATGATTGGCCAG TGTTTCTGCTGAAAACCGAGAAGGCAAGGCAATAAAATGTGCATACTTGGTTAGGCAGTCAACAATCACCCAAATCACAGTGTGGCCATGCGACAAAGGT AAACTTGTAATAAAATCCAAGGATATATCCTCTCATACCTTGTCTGGAATAGGTAAAGGTTGTAATAATCCTTTGTATTTCTTTAGCAAATATTTATTAT ACTGGCAAATGGCATAGTGTTTGATGAAGTCCTTCAGCTGCTTGTCTGCACCGGGCCAGTAACAAGAGGCAACCAACGAGCTAAAGTCGGTTTCCAGCCA TAGTGTCCGGCTGTAGGGGTCTCATGAAACTCTGTAGGCAAGGATACCCGCAATTCACCGATATAAGGTATAAACATCCTATTATGGTAGAATAACAGAC CTTGTGAAAAATGAAAATTTTGATTCCAAGTTACATCTGACTATTTAATTGTGATCTATGTTTGACCCTCTGGGGAGCCGTAGAAGTCACGGATCTGTTG AATGAGCGTAGGAAAAGAGGATGATAAGGCACAAAAAGAAGTTGTGGTCTCACTAGGACAACGTGATAAAGCATCGGCCACCCGATTAGAGATTCGATGA CTACACACATTTCCCGGACATACGCATAAGCATGTTGCATGCGGATGGACATCTTCCGGCTAATAAAACAACTGGATGGCCCTCTTGAGAGAGAACTGCT CCAATGGCAACCGTTGAAGCATCAGTCTCCACAGTAAATAGTTTAGTGAAATCTTGTAATTGTAAAACCGGTGTAGTTGTCATGGCTTGTTGTAATTTTG TAAAGGCCTCATGTGCCGCTATTGTCCATGTAAAACTTTGAGATCTAAGCAAATCAATGAGAGGAGTGACGTGCGTGGTCTTCTTTACAAATTTACGATA AAATCCGGTGAGGCCCAAAAAAACACTTGAATGTCGTGTGAGAATGTGGTTATG
• Tissue: pods
• Gene name: LI_gene_139558;
• Additional information: -

Expression of Ll_transcript_324442

FPKM

• PAB: 0
• PNAB: 0
• PS1: 2.1
• PS2: 1.2
• PS3: 0.6
• PW1: 0.7
• PW2: 0
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_324442

• Blastp: Retrovirus-related Pol polyprotein from transposon 297 from Sophophora with 45.05% of identity
• Blastx: Transposon Tf2-8 polyprotein from Schizosaccharomyces with 35.54% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019450597.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;