| Id Trinity | TRINITY_DN45397_c0_g1_i8 |
|---|---|
| Name Transcript | Ll_transcript_324439 |
| Sequence | GATCAAGCGGTGGAGAGTAATTGAGTAAATCACGTGGTCCATATTGAACTGGTTGAATTGCCCAAGGAGAAATATTTTTACCATAGTCAAATGAGTCATT CAATATCTCATTTACTTTACTCTTTAGTTCTGCTGAGTTATTTCCACTTCCCTTCTCTATGCTATTATCTTCCAAGAGCATTGTCCCCTTCTCTTTGTTT ACCTTATTTTGTTGATACCCGTTGGCCAAGGAGCTCATCCGCTCCCTTTGTTTTTCTGCACTTCGGTGCACCACCAAAAGCATAGGCCATGTCGTCCTTT GATCTTCCACGAAACTCCATGAATGAGGATGGTGTTTCCAACAAAGTCTCCCATTTCGCACAATGTGCTTCGTTGGTGGTTGTTGCGGTGGGTACCATTC TCGGTCCACTGGATGTTGGTGGGGGTTGGTCAAAGGAAACCAATGGTTCTGTTTCAGTGGAGCACAAATCCTGAGGGATATCCACTAACTGCTTCAACGG ATCACCATAGAATCGTCTCAACAAGGAGACGTGAAAAACTAGGTGCAAACGAGTTGTACTTGGAAGAGCTAGTTGATACGCCACCTGTCGGCGGGTGACT TAGAACGGTCCATAAAACCTTCAGCCCAACTTCTGAGAACGTCGTCGAGCAACTGAGTTCTGGCGATACGGTTGCAATCGCAGTAACACCCACTCACCGG TTTCAAAGGGTGTCACTGATGAGTGGACGAGAGGTGGATTCGGCAAGGAAATCCTTGACTGTTGGTGGAGCACGGCCATAAAGTGCCTCAAAAGGAGACA TGTTGAGAGAAGAGTGGAGATTGGTGTTATATCAGTACTCTGCCGAAGCAAGGTGAGCACACCATTTTGTTAGGTTAGAACCTGTGAAACAACGTAGGTA GGTTTGGAGACCTCTGTTCATGACCTCAGTTTGTCCATCAGACTGAGGGTGATAAGTTGTGCTATAGCACACAACATGGTGCCAAGGAGTTTGAATAGCT CTTTCAAAAATTTACTCACAAATATTTTGTCGCGATATGAAATTATACTCTTTGGAACCCCATGGAGTTTGCAGATTTCATTCAGGAAATGATTGGCCAG TGTTTCTGCTGAAAACCGAGAAGGCAAGGCAATAAAATGTGCATACTTGGTTAGGCAGTCAACAATCACCCAAATCACAGTGTGGCCATGCGACAAAGCA AATATTTATTATACTGGCAAATGGCATAGTGTTTGATGAAGTCCTTCAGCTGCTTGTCTGCACCGGGCCAGTAACAAGAGGCAACCAACGAGCTAAAGTC GGTTTCCAGCCATAGTGTCCGGCTGTAGGGGTCTCATGAAACTCTGTAGGCAAGGATACCCGCAATTCACCGATATAAGAAGTCACGGATCTGTTGAATG AGCGTAGGAAAAGAGGATGATAAGGCACAAAAAGAAGTTGTGGTCTCACTAGGACAACGTGATAAAGCATCGGCCACCCGATTAGAGATTCGATGACTAC ACACATTTCCCGGACATACGCATAAGCATGTTGCATGCGGATGGACATCTTCCGGCTAATAAAACAACTGGATGGCCCTCTTGAGAGAGAACTGCTCCAA TGGCAACCGTTGAAGCATCAGTCTCCACAGTAAATAGTTTAGTGAAATCTTGTAATTGTAAAACCGGTGTAGTTGTCATGGCTTGTTGTAATTTTGTAAA GGCCTCATGTGCCGCTATTGTCCATGTAAAACTTTGAGATCTAAGCAAATCAATGAGAGGAGTGACGTGCGTGGTCTTCTTTACAAATTTACGATAAAAT CCGGTGAGGCCCAAAAAAACACTTGAATGTCGTGTGAGAATGTGGTTATG BLAST |
| Tissue | pods |
| Gene name | LI_gene_139558; |
| Additional information | - |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_324439
| Blastp | Retrovirus-related Pol polyprotein from transposon 297 from Sophophora with 45.05% of identity |
|---|---|
| Blastx | Transposon Tf2-6 polyprotein from Schizosaccharomyces with 34.25% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019423049.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |