Ll_transcript_323684

• Id Trinity: TRINITY_DN45399_c0_g1_i2
• Name Transcript: Ll_transcript_323684
• Sequence: ATTTTTTTTAATGAACAACCATGTGGCATAATTTTATCATAAAAAACAAAAAAACAGAGAATTCCTATACTATCCTTGTCCCTTTAGGTTTTCCAATGAT TCTTATTCTTACACAGTGATAGTACTTATTACTTATATATCTCCACACACATGCATGCGAATTTGTGAAATTGATTGAGATCGAAGAGTGATCGATGGGT GTGGAAGAAGGTGTTCCTGCTGCTCTTGGATTCCACATGCCTGCTGAATGGGAACGCCATTCTCACTGTTGGATGGGTTGGCCTGTAAGACTTTCTTTAT ATGTTACAGTTTAACATAATCGATTATTTGATCTCATTATTTTATTAACAGGAACGGTGTGATAATTGGAGAGATAACGCTATTCATGCCCAACGTCTAT TTACCACTGTTGCTTCTGCTATCTCAGCTTTTGAACCTGTTACCATTTGTGCTTCTTCTTCTCAATGGGAGAATGCACGGAATCAACTACCCTTACATAT AAGGGTCGTCGAAATCAGCATGAATGACTCTTGGTTTCGTGATACTGGTCCCACTGTCAGTTTCTCTCTCTTTTTTTCCTTCAACTCATTTCTTATTCTT TCTAACAACACTTGCTTTTCATCTTAGCCATCAATTTCTTTGAAATAAATCTAATGCTGTAGATCTATTCGTTAATTCAAACCATTGAATTTTGAAGAAA CTGATGGCTAAGATGAAGAGCAAGCGTAAAAGAGTTACTCTGGGAGTAACTTGATTTGATGCCTCCCCTTTCGTTATTATCTTCTACTTTGTGACCATTT TCATATAGTTTGAACTGATTCATGTTAGAGTTTGCTTTAACATCCTAAACATGTGGGACTAGCTCGTTGACCTGTTGGGCTAATCATGTTTGGTCCAATA TGTTATGGATCTATAGTTAGGAACAGGCATGAGTCATGGCTTCGATCATCTGATTCATGTGTATGAAAATAAAATATGGGTTATAATCTGGAGACTCTGC TTTTTGTTGTTTACACTTTTTCATTCTGTTACTGTTTTTGTTCAATAGTTTGTTGTTAGAAGAAATCCTTCAGAGCCCGGCGATGAACACCATCCGATTG CAGGGATTGACTGGACCTTCAATAGTTGGGGAGGTGTAGAAGATGGATGTTACTCTGACTGGAGTCAGGATACCCTTGTTGCGAGAAAGATTTTGGAAAT TGAGAAGATTCCTAAATTTCCGCATTCAATGGTGCTTGAAGGTGGAAGCATCCATGTGGATGGAGAAGGAACTTGTCTTACCACTGAAGAGTGTCTCTTG AACAAGAATAGGAACCCTCATTTGAGTAAGAGCCAAATTGAGGATGAACTTAAGGCATATCTTGGAATCAGGAAGGTCATATGGTTGCCTCACGGATTGT ATGGAGACGATGATACAAATGGTCATATTGATAACATGTGCTGTTTTGTGAGGCCTGGTGTGGTTCTGCTGTCTTGGACTGATGATGAAACTGATCCACA GTATGAAAGATCTGTAGAAGCATATTCTTTGCTTTCAAGTGTAACTGATGCCAATAATAGAAAATTGGAAATAATTAAACTCCATGTCCCTGGTCCTCTC TATATGACAGAGGAAGAGGCTGCTGGGGTTTTTCAGGTAAAGTTTTAAGTTTGCATTTCTTTCCTTTTACATTTAAACTTCTATCTCGTAGTAGTTTAAA ATTATAAAGAAGGAAGACCGTGTTATCGTTATTTTTCACTTCATTTAACAAAGTACAGAAATAATTTTCAAAATATGATTCCAATGGTCATTGTAGTGTA TCTTTAAATGACGCAATGCATAGTCTGTTGCTGTATGGTCATCTGTTTTAGAACTTTAAGATGTCATATTTGAGTGCACTCTTTTGTTTGTGGCAATATA GTTTGCTATGTCACTGGCCTTATATTTTAAATGTCGGTTGCAAAAATGCTGTCATCAGACTGGGTACCACACACAGAACCATACAGGTACACCTATGGTT TTGTGGGTATCCACTAAATATTGCCCGAATCATTTTTTAGGAACATCGGTTTGTGATCAGTTGCAGACATTAAAAGTTGACATTTCAAGTGATGGCTATG CTACACCTTATTATATAAAAAATGTATCCTGAGCTCAAAGCAACATTGATGCATGGTATGATCAACATTAAAGTGGTACTGGTATTATTGGTTACACTTC CGAGTTGAGTTTTTCAAGCTACTAAACAGAGTGACAGACTAAGAGAATGTTTGTTCTGATGTAATTCTATATTTGTCAGGATGATGAGGCTAAGCCGAGA CTCCCAGGCACTAGGCTTGCTGCTTCCTATGTAAACTTCTACATTGCAAATGGAGCTATTATTACACCACAATTTGGAGATAAAAAATGGGATGATGAAG CTGTCAGAGTCCTATCTAAGGCATTTCCTGATCATAAAGTTGTGGGAATTGAAGGTTCCAGGGAGATTGTTTTGGCTGGTGGAAATATACACTGCATTAC TCAGCAACAACCAGACATTTGATCAAATTGTTGCATTGGAGTCTTTATGTTTCAAATTAAATAATTAAATTCCTTGGTTTGCAAGGTGGTGGAATTGTAT TGGAAATAAAATTTAACTGGCATTCCAAATTGCAAAATCATGGTTTATTCTGTTGAATGATTGAATCGAATTTTTTTAGAATAAACTAAAACAAGTTTTG CTTTGCTTTTAAGCAGA
• Tissue: pods
• Gene name: LI_gene_139563;
• Additional information: details;

Expression of Ll_transcript_323684

FPKM

• PAB: 0.5
• PNAB: 0.6
• PS1: 0.2
• PS2: 0.2
• PS3: 0.2
• PW1: 0
• PW2: 0.3
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_323684

• Blastp: Agmatine deiminase from Arabidopsis with 77.94% of identity
• Blastx: Agmatine deiminase from Arabidopsis with 72.02% of identity
• Eggnog: Agmatine deiminase(COG2957)
• Kegg: Link to kegg annotations (AT5G08170)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019439055.1)
• Pfam: Porphyromonas-type peptidyl-arginine deiminase (PF04371.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;