Ll_transcript_323685

• Id Trinity: TRINITY_DN45399_c0_g1_i3
• Name Transcript: Ll_transcript_323685
• Sequence: ATTTTTTTTAATGAACAACCATGTGGCATAATTTTATCATAAAAAACAAAAAAACAGAGAATTCCTATACTATCCTTGTCCCTTTAGGTTTTCCAATGAT TCTTATTCTTACACAGTGATAGTACTTATTACTTATATATCTCCACACACATGCATGCGAATTTGTGAAATTGATTGAGATCGAAGAGTGATCGATGGGT GTGGAAGAAGGTGTTCCTGCTGCTCTTGGATTCCACATGCCTGCTGAATGGGAACGCCATTCTCACTGTTGGATGGGTTGGCCTGAACGGTGTGATAATT GGAGAGATAACGCTATTCATGCCCAACGTCTATTTACCACTGTTGCTTCTGCTATCTCAGCTTTTGAACCTGTTACCATTTGTGCTTCTTCTTCTCAATG GGAGAATGCACGGAATCAACTACCCTTACATATAAGGGTCGTCGAAATCAGCATGAATGACTCTTGGTTTCGTGATACTGGTCCCACTGTCAGTTTCTCT CTCTTTTTTTCCTTCAACTCATTTCTTATTCTTTCTAACAACACTTGCTTTTCATCTTAGCCATCAATTTCTTTGAAATAAATCTAATGCTGTAGATCTA TTCGTTAATTCAAACCATTGAATTTTGAAGAAACTGATGGCTAAGATGAAGAGCAAGCGTAAAAGAGTTACTCTGGGAGTAACTTGATTTGATGCCTCCC CTTTCGTTATTATCTTCTACTTTGTGACCATTTTCATATAGTTTGAACTGATTCATGTTAGAGTTTGCTTTAACATCCTAAACATGTGGGACTAGCTCGT TGACCTGTTGGGCTAATCATGTTTGGTCCAATATGTTATGGATCTATAGTTAGGAACAGGCATGAGTCATGGCTTCGATCATCTGATTCATGTGTATGAA AATAAAATATGGGTTATAATCTGGAGACTCTGCTTTTTGTTGTTTACACTTTTTCATTCTGTTACTGTTTTTGTTCAATAGTTTGTTGTTAGAAGAAATC CTTCAGAGCCCGGCGATGAACACCATCCGATTGCAGGGATTGACTGGACCTTCAATAGTTGGGGAGGTGTAGAAGATGGATGTTACTCTGACTGGAGTCA GGATACCCTTGTTGCGAGAAAGATTTTGGAAATTGAGAAGATTCCTAAATTTCCGCATTCAATGGTGCTTGAAGGTGGAAGCATCCATGTGGATGGAGAA GGAACTTGTCTTACCACTGAAGAGTGTCTCTTGAACAAGAATAGGAACCCTCATTTGAGTAAGAGCCAAATTGAGGATGAACTTAAGGCATATCTTGGAA TCAGGAAGGTCATATGGTTGCCTCACGGATTGTATGGAGACGATGATACAAATGGTCATATTGATAACATGTGCTGTTTTGTGAGGCCTGGTGTGGTTCT GCTGTCTTGGACTGATGATGAAACTGATCCACAGTATGAAAGATCTGTAGAAGCATATTCTTTGCTTTCAAGTGTAACTGATGCCAATAATAGAAAATTG GAAATAATTAAACTCCATGTCCCTGGTCCTCTCTATATGACAGAGGAAGAGGCTGCTGGGGTTTTTCAGGTAAAGTTTTAAGTTTGCATTTCTTTCCTTT TACATTTAAACTTCTATCTCGTAGTAGTTTAAAATTATAAAGAAGGAAGACCGTGTTATCGTTATTTTTCACTTCATTTAACAAAGTACAGAAATAATTT TCAAAATATGATTCCAATGGTCATTGTAGTGTATCTTTAAATGACGCAATGCATAGTCTGTTGCTGTATGGTCATCTGTTTTAGAACTTTAAGATGTCAT ATTTGAGTGCACTCTTTTGTTTGTGGCAATATAGTTTGCTATGTCACTGGCCTTATATTTTAAATGTCGGTTGCAAAAATGCTGTCATCAGACTGGGTAC CACACACAGAACCATACAGGTACACCTATGGTTTTGTGGGTATCCACTAAATATTGCCCGAATCATTTTTTAGGAACATCGGTTTGTGATCAGTTGCAGA CATTAAAAGTTGACATTTCAAGTGATGGCTATGCTACACCTTATTATATAAAAAATGTATCCTGAGCTCAAAGCAACATTGATGCATGGATGATGAGGCT AAGCCGAGACTCCCAGGCACTAGGCTTGCTGCTTCCTATGTAAACTTCTACATTGCAAATGGAGCTATTATTACACCACAATTTGGAGATAAAAAATGGG ATGATGAAGCTGTCAGAGTCCTATCTAAGGCATTTCCTGATCATAAAGTTGTGGGAATTGAAGGTTCCAGGGAGATTGTTTTGGCTGGTGGAAATATACA CTGCATTACTCAGCAACAACCAGACATTTGATCAAATTGTTGCATTGGAGTCTTTATGTTTCAAATTAAATAATTAAATTCCTTGGTTTGCAAGGTGGTG GAATTGTATTGGAAATAAAATTTAACTGGCATTCCAAATTGCAAAATCATGGTTTATTCTGTTGAATGATTGAATCGAATTTTTTTAGAATAAACTAAAA CAAGTTTTGCTTTGCTTTTAAGCAGA
• Tissue: pods
• Gene name: LI_gene_139563;
• Additional information: details;

Expression of Ll_transcript_323685

FPKM

• PAB: 0
• PNAB: 0
• PS1: 0.1
• PS2: 0.2
• PS3: 0.1
• PW1: 0
• PW2: 0.2
• PW3: 0.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_323685

• Blastp: Agmatine deiminase from Arabidopsis with 77.94% of identity
• Blastx: Agmatine deiminase from Arabidopsis with 72.02% of identity
• Eggnog: Agmatine deiminase(COG2957)
• Kegg: Link to kegg annotations (AT5G08170)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019439055.1)
• Pfam: Porphyromonas-type peptidyl-arginine deiminase (PF04371.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;