| Id Trinity | TRINITY_DN45399_c0_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_323686 |
| Sequence | ATTTTTTTTAATGAACAACCATGTGGCATAATTTTATCATAAAAAACAAAAAAACAGAGAATTCCTATACTATCCTTGTCCCTTTAGGTTTTCCAATGAT TCTTATTCTTACACAGTGATAGTACTTATTACTTATATATCTCCACACACATGCATGCGAATTTGTGAAATTGATTGAGATCGAAGAGTGATCGATGGGT GTGGAAGAAGGTGTTCCTGCTGCTCTTGGATTCCACATGCCTGCTGAATGGGAACGCCATTCTCACTGTTGGATGGGTTGGCCTGAACGGTGTGATAATT GGAGAGATAACGCTATTCATGCCCAACGTCTATTTACCACTGTTGCTTCTGCTATCTCAGCTTTTGAACCTGTTACCATTTGTGCTTCTTCTTCTCAATG GGAGAATGCACGGAATCAACTACCCTTACATATAAGGGTCGTCGAAATCAGCATGAATGACTCTTGGTTTCGTGATACTGGTCCCACTGTCAGTTTCTCT CTCTTTTTTTCCTTCAACTCATTTCTTATTCTTTCTAACAACACTTGCTTTTCATCTTAGCCATCAATTTCTTTGAAATAAATCTAATGCTGTAGATCTA TTCGTTAATTCAAACCATTGAATTTTGAAGAAACTGATGGCTAAGATGAAGAGCAAGCGTAAAAGAGTTACTCTGGGAGTAACTTGATTTGATGCCTCCC CTTTCGTTATTATCTTCTACTTTGTGACCATTTTCATATAGTTTGAACTGATTCATGTTAGAGTTTGCTTTAACATCCTAAACATGTGGGACTAGCTCGT TGACCTGTTGGGCTAATCATGTTTGGTCCAATATGTTATGGATCTATAGTTAGGAACAGGCATGAGTCATGGCTTCGATCATCTGATTCATGTTTTGTTG TTAGAAGAAATCCTTCAGAGCCCGGCGATGAACACCATCCGATTGCAGGGATTGACTGGACCTTCAATAGTTGGGGAGGTGTAGAAGATGGATGTTACTC TGACTGGAGTCAGGATACCCTTGTTGCGAGAAAGATTTTGGAAATTGAGAAGATTCCTAAATTTCCGCATTCAATGGTGCTTGAAGGTGGAAGCATCCAT GTGGATGGAGAAGGAACTTGTCTTACCACTGAAGAGTGTCTCTTGAACAAGAATAGGAACCCTCATTTGAGTAAGAGCCAAATTGAGGATGAACTTAAGG CATATCTTGGAATCAGGAAGGTCATATGGTTGCCTCACGGATTGTATGGAGACGATGATACAAATGGTCATATTGATAACATGTGCTGTTTTGTGAGGCC TGGTGTGGTTCTGCTGTCTTGGACTGATGATGAAACTGATCCACAGTATGAAAGATCTGTAGAAGCATATTCTTTGCTTTCAAGTGTAACTGATGCCAAT AATAGAAAATTGGAAATAATTAAACTCCATGTCCCTGGTCCTCTCTATATGACAGAGGAAGAGGCTGCTGGGGTTTTTCAGGATGATGAGGCTAAGCCGA GACTCCCAGGCACTAGGCTTGCTGCTTCCTATGTAAACTTCTACATTGCAAATGGAGCTATTATTACACCACAATTTGGAGATAAAAAATGGGATGATGA AGCTGTCAGAGTCCTATCTAAGGCATTTCCTGATCATAAAGTTGTGGGAATTGAAGGTTCCAGGGAGATTGTTTTGGCTGGTGGAAATATACACTGCATT ACTCAGCAACAACCAGACATTTGATCAAATTGTTGCATTGGAGTCTTTATGTTTCAAATTAAATAATTAAATTCCTTGGTTTGCAAGGTGGTGGAATTGT ATTGGAAATAAAATTTAACTGGCATTCCAAATTGCAAAATCATGGTTTATTCTGTTGAATGATTGAATCGAATTTTTTTAGAATAAACTAAAACAAGTTT TGCTTTGCTTTTAAGCAGA BLAST |
| Tissue | pods |
| Gene name | LI_gene_139563; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_323686
| Blastp | Agmatine deiminase from Arabidopsis with 72.63% of identity |
|---|---|
| Blastx | Agmatine deiminase from Arabidopsis with 72.63% of identity |
| Eggnog | Agmatine deiminase(COG2957) |
| Kegg | Link to kegg annotations (AT5G08170) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019439055.1) |
| Pfam | Porphyromonas-type peptidyl-arginine deiminase (PF04371.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |