Id Trinity | TRINITY_DN45404_c0_g1_i6 |
---|---|
Name Transcript | Ll_transcript_469479 |
Sequence | CGGAAGGGATTAAAGAGTAGAGAGAGGAGGGTTCAGAAATTAGAATTTCGTACGAAATAGAAGAAAAATGAATCATTATTCAGTGCGGCGAACGGCGGTG GCAGTGATGAGTCGATGTTACTCCTCCACCGTCGCCAAAAAGATATCGAAACCCATTCCCCGCCCTAAAGAAATCCCATTTCAGCCTAGGGCTTCAAACT CCGTGAAGCTGGTGGGTAAGGTTATTATGCCGGTTCAGTTCCAAACCGGTTCAGATGGCAGCCACTGGGCCTCCACCGTGATCAGTCGTGAACATTCTTC TTCTCATCATGTATGGATTCCTGTTATATTTGAAGGTGATTTGGCTCACACTGCTCTCTCTCATCTCAAACCCGATGATTTCATCCACATTGCTGGTCAT CTCATTACTGATCCACCTCATTTCCCTATTCATCTTCATAACACTCACACCAATGTTCAAGTTATGGTTAAGTCACTCAACTTTGTTCAAGGTTATCCCG TGGAAAACAACGATGCTTCTTCAACTTCATCTGAAAATGAGAAGGATGAAATCAATCAACCGGGAGAGGATTTCAATTCAAAGGAAAATGAGGAGAATGA TGTTGATGAACCTTGGAAGGATCTGCTTCTTAACCCGAGTGAATGGTGGGATGTACGTCCAACAAAGGAGAATTCAAAAGGTGCTGCTTTCGAAAGAAAA ACGAGTGGTGACTTACTCTTTATAAATAGCTCAACTCCCAAATGGCTCGAAGAGAAGCTAGAGTTGTTGACGTTTGATTTGAAACCTGAATCGGAGAACT CAGCATCGGGTGCAAAGAAAAACTCAGCTCCTAACTTTATAGCATGGAGGGACCTTCTACAGGATCCAAAGCAGTGGTTTGATTTCCGTGACAGCAAAAA CAGTGGATTGGTGACCACAAAGTTCCCTGACTTCAAGCGCAAGGATGGCAGTCTTTCCATCTGGCTTGACGGAACTCCAAAGTGGGTTTTACCAAAACTT GAAGCACTGGAGATTGATGTACCAGTTGTGAAACCCAAACAAGCAAATGCCGGTGATGAGTCATGGAATGATTTGCTGAATAACCCAAATAAATGGTGGG ATAATAGATCAAATAAGAAAAATGAAAAAGGTCCCGACTTCAAGAACAAAGAAACTGGTGAGGCTCTGTGGGTTGACGGAGCTCCAAAGTGGTTTTTCTC TAAACTTGATAGTACAGAGATTGACGTATCAATTGTAGAATCCAAACAAGCAACTACTAGTAAAGGTGATGAGTCATGGAATGATTTGCTGAATAACCCA AATAAATGGTGGGATAATAGATCAAATAAGAAAAATGAAAAAGGTCCTGACTTCAAGAATAAAGAAACTGGTGAGGCTCTGTGGGTTAATGGAGCTCCAA AGTGGGTTTTATCTGAACTTGATAGAACAGAGATTGACATACCAATTGTAGAATCCGAACAAGCAACTTCTGGTAAAAGTCTGTATAGACATCTTCCTTG CTCATACAGACCTTACTATATTATTTTTCCTCAATCGCTCATTTTGTTCTTATGCAACGCAAGATTCTTCATTTCCTATTTCCATTTCCTGTTTTTCACC ATATTATGTTCTTAGGTACAGATCCTAACTTGGTTAAACCTGTCTTTGTCATTTAATGATTTGGCGAAAATTTGGTGGGAGAATAGATCAAATGAGGTAA GCCAATTTTCTAATGTCCTTGGTTTTAAAATTTCTGCTTGTTTTTTCATGCTTAACTAGATTTTGTTTATTGAGTTAATTCTTTGATCGTGAGGAGAATG AAAGAAGTCCTGACTTCAAGCACAAAGAAACCGGTGAAGTTCTGTTGCCACCCGTGAAAGCCTGAACAAAATGTAGAAATTTGTAGGAAGCACAAGGCAT AGAAAGAGAGGCAGGATATGAAGTCATTGACCAAGTTGGTTTTGCTCACTTTCATGTATTAAAATATGGGTTCCAAAAGTTATTGTTATTCTCATGTCTG CGAATGCAATTTTCATCACAATTTTTGTTACTTATTCCACTTTTGAGTGATATGAGATTTGCTCAAAATTTATGGGTGGGATCTTTACTAATCATGCCAT GCTTCACTGCCATCATGATATTGAATTGACAAAGTACCTACTCTATTTTATCTTATCAAAAGCGAATTAATTCATCATTGAAAACTATATAAACAAAGGA AATGTGTTTGCCCA BLAST |
Tissue | pods |
Gene name | LI_gene_139574; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_469479
Blastp | Protein OSB3, chloroplastic/mitochondrial from Arabidopsis with 40.75% of identity |
---|---|
Blastx | Protein OSB3, chloroplastic/mitochondrial from Arabidopsis with 40.75% of identity |
Eggnog | single-stranded DNA-binding protein(ENOG410YC5C) |
Kegg | Link to kegg annotations (AT5G44785) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019458978.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |