| Id Trinity | TRINITY_DN45406_c0_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_469814 |
| Sequence | CAATTTCAAAACCAAAACCCTCATTTCTCAAATACAATCATTATAATCTTTTCTCTCCAACGAAACCCTCACCGCTTTTCACTTCTCCAACTACATTGCA ACGACGTCGTAATGTTCACGCCTCAAAGGAAGGTAACGCCCACGGCGGCGTCATTCACGCCCCACCGTGGCACCACCTCCAATCTCCCGTCCTCCGTTTC GAAGGGTAAGTCCGTCCTTTTTGCAGAGGAACCACCGTTTCCTCCGCCGTTGGCTTCGATTAGCGAAACCACGACAGAGGTTGCCGTAGGGTTCGATGCA GGGAACATCGATGATTGGAGGAAATTTAAGGAGGCTGGGTTGCTCGATGAAGCAGTTATGCAGAGAAAAGACCATGAAGCGGTATTAGATAAGGTTTCGA GGCTCGAAAAAGAGCTTTTTGACTATCAGTACAACATGGGCCTCCTGTTGATTGAGAAGAATGAATGGAGTTTGAAGTTTGATCAACTAAGGCAACAACT AGCCGAAACAGAAGCAATTCTTAAACGAGAACAGTCAACACACTTAATTGCATTGTCTGAAGTTCAGAAGCGAGAGGAGAATTTGAGGAAAGCATTGAGC ACTGAGAAGCAGTGTGGGGCTGATCTTGAGAGAGCTTTGCGTGCAATGCAAGAAGAGCATGCTCAAATCCTGTCTTCCTCCAAGACAAAGTTAGCTGAAG CAGATGCATTAGTTGATGGGATTGAAGAGAAGTCGTCTGTGGTAAATAACAAACTGCATGATGCTGAAGCTAAGCTTGCTGAGGTAAACATAAGAAATGC TGAGCTGGATATGAAATTGCGAGAGCTGGAGGTTCGTGAAAGCTTGCTTCAGAAGGAACGTTCATCAGTAGCTACTGACCGGGAATCATTTGAGGCAACA TTCTATAAACAAAGGGAAGATTTGAAGGAATGGGAGAGGAAGCTACGTCAAAGAGAAGATATGCTTTCTGATGGTAGGCAGAATATTGGTGAGAGAGAGG AGAATGCCATTGAAACTGAGAAGAACTTGAAGCAGAAAGAGAGAGACCTGGAAGTGTTGGAAAAGAATATTAATTCATCTAATTCTGTATTGCATGAAAA GGAAGCTGAGATAAGTAGAAGATTAGTAGATCTAGATATGGAAGAGAAGAAAGTGGATTCTTTGAAGAGCATGCTGGAGATGAAAGAGAAAGAATTACTT GAAACTGAACTAAAGCTTAGTGCTAGAGAAAGAGAGGGGATCCAGAAGGTCCTTGCTGAGCAAAAAGATATGCTGGATTTAAAGTTGCAGCAGTTTGAGC TGGAAATGGAACAAAAGCGGAAATCCCTTGTTGAGGAGTTCAGAAGCAAGGAAGAAGCCTTGGAGCAGAGGGAAGTTGAAGTCAACCATAGAGAAACGAA GATTGGAAAAGAAGATCAGGTTTTGAGTAAGAAGGCTGAGAGAATAAAGGAGCAAAATAAGGAACTTGAAGTGAAGTTAAAATCTTTGAAGGAGAAGGAG AAGACTATGAAAATCAAAGAGAAAGAATTGGAGAAGGAAAAACAACAGTTGCTTGCTGATATGGAGAGTCTGGGAAATTTAAAAGTTGAACTTGAAAAGA CAAAAGCTGAAATTTCTCAGCAAGAACTGCAAATATGCCAAGAGAGTGAGAGTTTGAAGCTTACAGAAGATGAGAGGTCAGAGCATTCTCGTTTGCAGTT GGAACTAAAACAGGAGATAGAGCATACAAGATTGCAGAAGGGTTTGCTTTTGACAGAAACTGAGAGCTTAAGGAAGGATAGAGAGAGGTTTGAGAAAGAG TGGGAAGTGTTGGATGATAAAAAAGCTAAAATCAGTAAAGAGCAGCATGAGATTGATGTGGAGAAAGAAAGGTTAAGAAAACTGCAGCATACTGAAGAGG AGAAGCTAAAAAGAGAGAAACAAGATATGATAGATCATATAAAGAAAGAGATGGAGAAACTTGAATTGGAGAAGGAATCATTTAGAGAGTCAATGGAGCA AGAGAAGCTTCTTTTATCTGAAAAGGTGAAAAATGAAAAGGCTCAAATTCTCAATGATTTTGAATGGAAGACAAGGAATCTGGAGAATGAAATGCAGAAA AGGCAGGAGCAGATGGAGAAAGACCTGAAGGAAAGAGAGAGAAAATTTGAGGAGGAAATGGAAAGAGAGCTTAATAATATTAATGCCATGAAGGATTCTA CTGAGAAAGAATGGGAAGAGGTGAAGTCTGTAGGACTTAGGTTAGAGAATGAGAGGAAGGAACTCGAGTCAAACAAGCAGCAGCTTAAGTCAGGCCAGCA TGAGATGCACAAAGATTCTGAAATGCTTATTAATCTCAGCATGAAGGTTAAGAAGGAACGTGAACGCCTTGTGTCTGAAAGAAATCACTTTCTTGCACTT GTTGAGAAGCTAAGGAATTGCAGGGGCTGTGGAGAAGTTGTTAGGGACTTCGTTGTATCTGATGTTCAATTACCTGAGTGTAAAGAAAGAAAGGTTATTC CATTATCTACCTCCCCTGTTCTGAATGATGGGATTCTTAAGAACTCTGAAGACAACTTAGCTGCTTCTGACTCAAACTATTCAGGATCTGCGAGGCCTGT GTCTTGGCTCCGTAAATGCACATCAAAGATTTTTAATATATCTCCTATTAAAAGAACAGATGCTGTTAGTGCATCAGACACGGTTGGGTCATCACCACTG TCAGATGTGCATGTTAATACAAAACATGTAGAAAACATTGCATCTATTCCTAATGTAGTAGGAGCTAAAGGTGTTCTTGAAGAACAACAACCATCAGGTG TAATAGCAGCTCATCACTCTTCACAACACCAATTTGATAACATTGTTAGAGAGGTCGGTGATGAACACTCTCAACCTGTAGATAATCACAGCTACATGGA TAGTTTTGTAGATGGAGCTCCAGTTGATTCTCAACAGTCAGCTCCAAAGAGTCATCAACGTAGAGCTGGAAGGAAGAGCAAATCTGGAATTTCTCGAACA CGCTCAGTGAAGGCTGTAGTCAAAGAGGCTGAGGAGTTCCTGGGAAAAGCCGCAGAGAAAACAGAAGATGCTAGTTTGCAGTCTCTCAATACTGATCGTG TCAAAGAAGAGAGTCGAGAAGACTCCAGTGCCCGTAACACTGGAAGGAAGCGGCTACGAGAACAAAGTACCAGGGTTACAGAAAGTGAGCAGAATGTTGG TGATAGTGAAGTACAGTCAGATAGTGTTACAACTGGTGGTCGCAGGAAGAAGAGGCAAACAGCTGTTGCACCTATGCCAGTTTTAACTCAGAAACGATAC AATCTCAGGGGGCATAAGACCGCAAGTAATGTTTCATCAGCACAGGAAAAGTCCAAGGAAACTCGGAGTGTGGATAAAGAAGCTGCTGGTGGTAAAGTGG CACATAAGAACATGAACACTGATGCCGCCGCTGGTACTTCATCAGTAGTAGCTGATGACAATGTTCAAACCACACATCTGGTGCAGGTCTCAACAGCAAA AACTGTGGTGTTCTCAGAAGAGAAAGTTGTTAGGTTTGAAGTACCAAAAGATATTGTTGATGACAACGGTGTTGCAACTGATTTTGTGGATTGCGTGGAA GAAAATGCTCAACCGGAAGATGGAAACACAACCCGCGAAGTTGAAAATGTTAGAGTTGTTAGGGTGAAACCACCTTCCTGTTTTTATGATTGATTTCATT GGAGTTTTTAGATATATATTATATTTAATTCATTATACACGTTCGTAACAGTTTGAAGTACCAAAACACGTGGCTGATGAGAACGTTGCTGCGACCAACT CTGTGGTTCACGAGGAAGAAAATGCTCAACCCCAATATGGAGATGAGGATAATGATAATGAGTTGGTGGAGGAAGAGGAAGAAGAGGAGGGGGAGGAAAA GGAAGAGGAGGAGGGTGACGACGAAGAGGAGGAGGATGACGATGAAGAGGAGCATCCTGGTGAGGTGTCAATTGGAAAAAAGATCTTCAAATTTTTTACA TCATGATGGAAGTAGTGCCCTTTGATATCATAATAGACTATTAGATATACATATGCCCTTATTCCTTTTAAATAGGAGAGGTATGTAATATTTGTTGGGT TAGCTCTTGTGTTTGTTTTTAGCATTTGTTAATATACATCTCAATGAGGTTTATTGATAACTTGAGTAGAGAGTAAACTTTTTGTTTCAGGGTAGGAGGT TTAATAGAATTTGAAAGTTGAAACCTCTCTTTATGTTTATTTCCTGTAATAAATAAAGCTACTTGAGCTGCATGTGGTGGTGATCCAATTGATTTGGATG CTAAACAATTTTTGTTCATTTGCTAGGTTTGCCAAGAAATCCCAATTTTTCACTTGTGAGATACTGAGAATCATTTGACTATGAAATTTCATTATGAAAG TTACTTGCAGCTAGGTTTGTCTATGATGTCGGACCATACCTTCTGTCCCGCAAGTTGTATATGTAACATTGATATATAATTGGTTGCACA BLAST |
| Tissue | pods |
| Gene name | LI_gene_139580; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_469814
| Blastp | Protein CROWDED NUCLEI 1 from Arabidopsis with 37.6% of identity |
|---|---|
| Blastx | Protein CROWDED NUCLEI 2 from Arabidopsis with 39.78% of identity |
| Eggnog | Nuclear matrix constituent protein(ENOG4111KVI) |
| Kegg | Link to kegg annotations (AT1G67230) |
| CantataDB | Link to cantataDB annotations (CNT0002791) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019429419.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |