Ll_transcript_469815

• Id Trinity: TRINITY_DN45406_c0_g1_i6
• Name Transcript: Ll_transcript_469815
• Sequence: CAATTTCAAAACCAAAACCCTCATTTCTCAAATACAATCATTATAATCTTTTCTCTCCAACGAAACCCTCACCGCTTTTCACTTCTCCAACTACATTGCA ACGACGTCGTAATGTTCACGCCTCAAAGGAAGGTAACGCCCACGGCGGCGTCATTCACGCCCCACCGTGGCACCACCTCCAATCTCCCGTCCTCCGTTTC GAAGGGTAAGTCCGTCCTTTTTGCAGAGGAACCACCGTTTCCTCCGCCGTTGGCTTCGATTAGCGAAACCACGACAGAGGTTGCCGTAGGGTTCGATGCA GGGAACATCGATGATTGGAGGAAATTTAAGGAGGCTGGGTTGCTCGATGAAGCAGTTATGCAGAGAAAAGACCATGAAGCGGTATTAGATAAGGTTTCGA GGCTCGAAAAAGAGCTTTTTGACTATCAGTACAACATGGGCCTCCTGTTGATTGAGAAGAATGAATGGAGTTTGAAGTTTGATCAACTAAGGCAACAACT AGCCGAAACAGAAGCAATTCTTAAACGAGAACAGTCAACACACTTAATTGCATTGTCTGAAGTTCAGAAGCGAGAGGAGAATTTGAGGAAAGCATTGAGC ACTGAGAAGCAGTGTGGGGCTGATCTTGAGAGAGCTTTGCGTGCAATGCAAGAAGAGCATGCTCAAATCCTGTCTTCCTCCAAGACAAAGTTAGCTGAAG CAGATGCATTAGTTGATGGGATTGAAGAGAAGTCGTCTGTGGTAAATAACAAACTGCATGATGCTGAAGCTAAGCTTGCTGAGGTAAACATAAGAAATGC TGAGCTGGATATGAAATTGCGAGAGCTGGAGGTTCGTGAAAGCTTGCTTCAGAAGGAACGTTCATCAGTAGCTACTGACCGGGAATCATTTGAGGCAACA TTCTATAAACAAAGGGAAGATTTGAAGGAATGGGAGAGGAAGCTACGTCAAAGAGAAGATATGCTTTCTGATGGTAGGCAGAATATTGGTGAGAGAGAGG AGAATGCCATTGAAACTGAGAAGAACTTGAAGCAGAAAGAGAGAGACCTGGAAGTGTTGGAAAAGAATATTAATTCATCTAATTCTGTATTGCATGAAAA GGAAGCTGAGATAAGTAGAAGATTAGTAGATCTAGATATGGAAGAGAAGAAAGTGGATTCTTTGAAGAGCATGCTGGAGATGAAAGAGAAAGAATTACTT GAAACTGAACTAAAGCTTAGTGCTAGAGAAAGAGAGGGGATCCAGAAGGTCCTTGCTGAGCAAAAAGATATGCTGGATTTAAAGTTGCAGCAGTTTGAGC TGGAAATGGAACAAAAGCGGAAATCCCTTGTTGAGGAGTTCAGAAGCAAGGAAGAAGCCTTGGAGCAGAGGGAAGTTGAAGTCAACCATAGAGAAACGAA GATTGGAAAAGAAGATCAGGTTTTGAGTAAGAAGGCTGAGAGAATAAAGGAGCAAAATAAGGAACTTGAAGTGAAGTTAAAATCTTTGAAGGAGAAGGAG AAGACTATGAAAATCAAAGAGAAAGAATTGGAGAAGGAAAAACAACAGTTGCTTGCTGATATGGAGAGTCTGGGAAATTTAAAAGTTGAACTTGAAAAGA CAAAAGCTGAAATTTCTCAGCAAGAACTGCAAATATGCCAAGAGAGTGAGAGTTTGAAGCTTACAGAAGATGAGAGGTCAGAGCATTCTCGTTTGCAGTT GGAACTAAAACAGGAGATAGAGCATACAAGATTGCAGAAGGGTTTGCTTTTGACAGAAACTGAGAGCTTAAGGAAGGATAGAGAGAGGTTTGAGAAAGAG TGGGAAGTGTTGGATGATAAAAAAGCTAAAATCAGTAAAGAGCAGCATGAGATTGATGTGGAGAAAGAAAGGTTAAGAAAACTGCAGCATACTGAAGAGG AGAAGCTAAAAAGAGAGAAACAAGATATGATAGATCATATAAAGAAAGAGATGGAGAAACTTGAATTGGAGAAGGAATCATTTAGAGAGTCAATGGAGCA AGAGAAGCTTCTTTTATCTGAAAAGGTGAAAAATGAAAAGGCTCAAATTCTCAATGATTTTGAATGGAAGACAAGGAATCTGGAGAATGAAATGCAGAAA AGGCAGGAGCAGATGGAGAAAGACCTGAAGGAAAGAGAGAGAAAATTTGAGGAGGAAATGGAAAGAGAGCTTAATAATATTAATGCCATGAAGGATTCTA CTGAGAAAGAATGGGAAGAGGTGAAGTCTGTAGGACTTAGGTTAGAGAATGAGAGGAAGGAACTCGAGTCAAACAAGCAGCAGCTTAAGTCAGGCCAGCA TGAGATGCACAAAGATTCTGAAATGCTTATTAATCTCAGCATGAAGGTTAAGAAGGAACGTGAACGCCTTGTGTCTGAAAGAAATCACTTTCTTGCACTT GTTGAGAAGCTAAGGAATTGCAGGGGCTGTGGAGAAGTTGTTAGGGACTTCGTTGTATCTGATGTTCAATTACCTGAGTGTAAAGAAAGAAAGGTTATTC CATTATCTACCTCCCCTGTTCTGAATGATGGGATTCTTAAGAACTCTGAAGACAACTTAGCTGCTTCTGACTCAAACTATTCAGGATCTGCGAGGCCTGT GTCTTGGCTCCGTAAATGCACATCAAAGATTTTTAATATATCTCCTATTAAAAGAACAGATGCTGTTAGTGCATCAGACACGGTTGGGTCATCACCACTG TCAGATGTGCATGTTAATACAAAACATGTAGAAAACATTGCATCTATTCCTAATGTAGTAGGAGCTAAAGGTGTTCTTGAAGAACAACAACCATCAGGTG TAATAGCAGCTCATCACTCTTCACAACACCAATTTGATAACATTGTTAGAGAGGTCGGTGATGAACACTCTCAACCTGTAGATAATCACAGCTACATGGA TAGTTTTGTAGATGGAGCTCCAGTTGATTCTCAACAGTCAGCTCCAAAGAGTCATCAACGTAGAGCTGGAAGGAAGAGCAAATCTGGAATTTCTCGAACA CGCTCAGTGAAGGCTGTAGTCAAAGAGGCTGAGGAGTTCCTGGGAAAAGCCGCAGAGAAAACAGAAGATGCTAGTTTGCAGTCTCTCAATACTGATCGTG TCAAAGAAGAGAGTCGAGAAGACTCCAGTGCCCGTAACACTGGAAGGAAGCGGCTACGAGAACAAAGTACCAGGGTTACAGAAAGTGAGCAGAATGTTGG TGATAGTGAAGTACAGTCAGATAGTGTTACAACTGGTGGTCGCAGGAAGAAGAGGCAAACAGCTGTTGCACCTATGCCAGTTTTAACTCAGAAACGATAC AATCTCAGGGGGCATAAGACGTAAGTTTCGTGTTTGTGCATCCTCTGGGGAAATAACACTTTACATTATAGTGTATGTTGTGTCTATTTATCAGGGATAA GTTTCTTGGATGTGAATTGAATACAATTGAGTATTGTTTTTATAATTAAATTAAACTGATTAAAAAGAAATGACATGTTCAAAATAAATTTATTATTGTT GACTTCCACATTGATGGTTTCATTTTTTATTTTCCCCTCCCCTTGCCTCTTGCCCAAAAAGGAATAAAAGAAAAATCTGGATTCAATTTGTTGCACTGGT TGGCTTGATCTTGTCATCGTGATTTGCAAAAGCAGTTCATAACATTTCCCATTCCAATTTATCTTTCTGGCTACCTACTGATTAGTCAATGTGATTTATA CTTTCTCTAATAGCAAGCGCGATGGAATATTTGTC
• Tissue: pods
• Gene name: LI_gene_139580;
• Additional information: details;

Expression of Ll_transcript_469815

FPKM

• PAB: 0.1
• PNAB: 0.3
• PS1: 0.8
• PS2: 0.5
• PS3: 0.3
• PW1: 0.2
• PW2: 0.5
• PW3: 0.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_469815

• Blastp: Protein CROWDED NUCLEI 1 from Arabidopsis with 38.8% of identity
• Blastx: Protein CROWDED NUCLEI 2 from Arabidopsis with 40.22% of identity
• Eggnog: Nuclear matrix constituent protein(ENOG4111KVI)
• Kegg: Link to kegg annotations (AT1G67230)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019429424.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;