Ll_transcript_469570

• Id Trinity: TRINITY_DN45418_c0_g1_i1
• Name Transcript: Ll_transcript_469570
• Sequence: GTAAAAACAGAAGTGATATTTTGTTGCCGTTACAATGTTGCAGAAAATGCAGACCACTGCGGCCCTTGCAGGCCTTCGATTAAGTTGCAAAATATGCCCT TCCCCTATCTCTTCTCTCCCTAATCCCTCTCCTCCATTCAACCCTTCTCTCCCTCTTCCTCTTCAGCTCCACAAACAGTTTTCACTCGCTTCTCAGAATG TTCTGGAAGCCGCTTCTCCTCTCAGGCCTTGTGCCACTCTATCTAATGCCTACAAGTGTTTATTTCCCTTTTTGCATTTTATTATCTTGTTTTGAATTTA ATGCTCCTATTGTTATTTAACGTATCGTTTTGTAACTATGTCAAATGGTGCAGTGAAACAACTGAATTGGCTGACATAGACTGGGACAACCTTGGATTTA GTATTCAGCCCACTGACTATATGTATTTCATGAAATGCCAACAAGGTGGAACATTCTCTAAAGGTGAACTCAAGCGTTATGGTAACATTGAGTTAAGTCC ATGTGCCGGAGTTTTAAACTATGGCCAGGGATTATTTGAGGGTTTGAAAGCCTATCGAAAACAAGATGGGAATATACTCCTCTTTCGTCCCGAAGAAAAT GCCGAGCGGATGAAAGCAGGCGCGGAGAGAATGTCCATGGCATCACCTAGCACAGAGCAGTTTCTGCAAGCTGTTAAGGATACTGTTTTAGCAAACAAAC GTTGGATTCCTCCTGCAGGTAAAGGTTCCTTGTATATTAGACCATTGCTAATAGGAAGTGGAGCTGTGCTTGGTGTTGCACCCGCTCCAGAGTACACCTT TCTAGTATATGTTTCACCTGTTGGAAATTACTTCAAGGAAGGGTTGGCCCCAATACATTTGATAGTTGAGAATGACTTACATCGTGCAACTCCTGGTGGC ACTGGAGGAGTGAAGACCATTGGAAACTATGCTGCAGTTCTGAAGGCACAATCTGCAGCAAAATTGAAAGGCTACTCTGATGCTTTATACCTTGATTGTG TGCACAAGAAATATTTGGAGGAGGTTTCTTCTTGCAACATTTTCGTTGTCAAGGGTAACACTATTTCAACTCCTGCTATTAAAGGGACTATCCTACCTGG CATTACTCGAAAAAGTATAATCGACCTTGCTCGAAGCCAAGGTTTTCAGGTTGAGGAGCGACTAGTGTCAGTTGATGAATTGGTAGATGCTGATGAGGTC TTCTGCACTGGGACTGCTGTGGTTGTGTCACCTGTTGGTAGTGTTACTCATCTTGGCAAGAGGATATCCTATGGAAACGGTGTAGGAGCAGTGACCCGTC AACTTCATGCATCCCTTACAAGATTGCAGATGGGTCTCATAGCTGATGAGATGAATTGGACTCTTGAGCTGAGATAGGCACAGCCTCTATCGGTACTAAC ATTTTGTAGGCCCTGCCTGAAATAATCCGCCCATTCATTTAAGTAAATGTTAGCAATATCTATATATAATCTTTTTAAACTGCATGTAGATGTTAGCAAT ATCTATAACTGCATGTAGATGTTAGCAATATCTATATATCATTTTTTTAGCTATATACAATTGTTTTTTAAATAGTAACAGTAGCTATATCTATACTTTT TCTTATAAAATGTTTGCATAACTCCAAACATATATTGTTGAAGTAGAGAAAGATCCAAGACATAAAACGAAATCTTTGGTCTAGCTCCTTTACTTTGTTT CCCAATTTAGCAAACATTGTTAAT
• Tissue: pods
• Gene name: LI_gene_139609;
• Additional information: details;

Expression of Ll_transcript_469570

FPKM

• PAB: 0
• PNAB: 0.6
• PS1: 0.4
• PS2: 0.3
• PS3: 0.2
• PW1: 0
• PW2: 0.7
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_469570

• Blastp: Branched-chain amino acid aminotransferase 2, chloroplastic from Humulus with 82.7% of identity
• Blastx: Branched-chain amino acid aminotransferase 2, chloroplastic from Humulus with 82.7% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_003611530.1)
• Pfam: Amino-transferase class IV (PF01063.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;