Ll_transcript_469573

• Id Trinity: TRINITY_DN45418_c0_g1_i2
• Name Transcript: Ll_transcript_469573
• Sequence: GTAAAAACAGAAGTGATATTTTGTTGCCGTTACAATGTTGCAGAAAATGCAGACCACTGCGGCCCTTGCAGGCCTTCGATTAAGTTGCAAAATATGCCCT TCCCCTATCTCTTCTCTCCCTAATCCCTCTCCTCCATTCAACCCTTCTCTCCCTCTTCCTCTTCAGCTCCACAAACAGTTTTCACTCGCTTCTCAGAATG TTCTGGAAGCCGCTTCTCCTCTCAGGCCTTGTGCCACTCTATCTAATGCCTACAATGAAACAACTGAATTGGCTGACATAGACTGGGACAACCTTGGATT TAGTATTCAGCCCACTGACTATATGTATTTCATGAAATGCCAACAAGGTGGAACATTCTCTAAAGGTGAACTCAAGCGTTATGGTAACATTGAGTTAAGT CCATGTGCCGGAGTTTTAAACTATGGCCAGGGATTATTTGAGGGTTTGAAAGCCTATCGAAAACAAGATGGGAATATACTCCTCTTTCGTCCCGAAGAAA ATGCCGAGCGGATGAAAGCAGGCGCGGAGAGAATGTCCATGGCATCACCTAGCACAGAGCAGTTTCTGCAAGCTGTTAAGGATACTGTTTTAGCAAACAA ACGTTGGATTCCTCCTGCAGGTAAAGGTTCCTTGTATATTAGACCATTGCTAATAGGAAGTGGAGCTGTGCTTGGTGTTGCACCCGCTCCAGAGTACACC TTTCTAGTATATGTTTCACCTGTTGGAAATTACTTCAAGGAAGGGTTGGCCCCAATACATTTGATAGTTGAGAATGACTTACATCGTGCAACTCCTGGTG GCACTGGAGGAGTGAAGACCATTGGAAACTATGCTGCAGTTCTGAAGGCACAATCTGCAGCAAAATTGAAAGGCTACTCTGATGCTTTATACCTTGATTG TGTGCACAAGAAATATTTGGAGGAGGTTTCTTCTTGCAACATTTTCGTTGTCAAGGGTAACACTATTTCAACTCCTGCTATTAAAGGGACTATCCTACCT GGCATTACTCGAAAAAGTATAATCGACCTTGCTCGAAGCCAAGGTTTTCAGGTTGAGGAGCGACTAGTGTCAGTTGATGAATTGGTAGATGCTGATGAGG TCTTCTGCACTGGGACTGCTGTGGTTGTGTCACCTGTTGGTAGTGTTACTCATCTTGGCAAGAGGATATCCTATGGAAACGGTGTAGGAGCAGTGACCCG TCAACTTCATGCATCCCTTACAAGATTGCAGATGGGTCTCATAGCTGATGAGATGAATTGGACTCTTGAGCTGAGATAGGCACAGCCTCTATCGGTACTA ACATTTTGTAGGCCCTGCCTGAAATAATCCGCCCATTCATTTAAGTAAATGTTAGCAATATCTATATATAATCTTTTTAAACTGCATGTAGATGTTAGCA ATATCTATAACTGCATGTAGATGTTAGCAATATCTATATATCATTTTTTTAGCTATATACAATTGTTTTTTAAATAGTAACAGTAGCTATATCTATACTT TTTCTTATAAAATGTTTGCATAACTCCAAACATATATTGTTGAAGTAGAGAAAGATCCAAGACATAAAACGAAATCTTTGGTCTAGCTCCTTTACTTTGT TTCCCAATTTAGCAAACATTGTTAAT
• Tissue: pods
• Gene name: LI_gene_139609;
• Additional information: details;

Expression of Ll_transcript_469573

FPKM

• PAB: 0.4
• PNAB: 3.8
• PS1: 2.9
• PS2: 0.4
• PS3: 0.8
• PW1: 3.9
• PW2: 3
• PW3: 2.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_469573

• Blastp: Branched-chain amino acid aminotransferase 2, chloroplastic from Humulus with 75.74% of identity
• Blastx: Branched-chain amino acid aminotransferase 2, chloroplastic from Humulus with 79.67% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019424385.1)
• Pfam: Amino-transferase class IV (PF01063.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;