Ll_transcript_469448

• Id Trinity: TRINITY_DN45423_c0_g1_i1
• Name Transcript: Ll_transcript_469448
• Sequence: CACTTTCTCTCTCCTTTCTCTCTCTCTAGAACTCACTCAGTCACTCTTCTCTTCGTTGCTGCTACTTTTCTCTCTTTGGAACTTGTGATGTGTGTCTTTC TGAGGACTTTCTGTTCCTGAAAGGGAAGCCAGTGGTTTATAAACAAGAACGGCTACTGTTGATGATTGTTCAGTAAATCAGTGCTAAAGTTTGGTTTTAT ATTAAAAATCTTGCAGAATAGATGATAATGGACCCAAGTCTTGATCGGATTAATGGTTCCTTAAATGAAAACCGGTTTGGGAATCAGTCTTTGCCAATTC TGCAGAATCAGAGATATGAAAATGGTTTCTTTGATCAAACTAGGGAATTTGGTTACCTTCAGTCCAATCTTATGCCTTCTGATACACCTTCATCCTCAAT TTTGACACACGAGGAACCTTCTCTAGAGGACTGTGATTTTTCCGATGCAGTTTTGAGATACATTAGTCAGATCCTCATGGAAGAAGATATGGAAGATAAG ACAGACATGCTTCAGGATTCTTTGGATCTTCAAGTTGCTGAGAAATCATTCTATGAGGTAATAGGCGAAAAGTACCCGCATTCGCAATTAGGAAATCAGA GCTTTATTAATCCAAATGATGGAGGTGGAGATTATAACTTTTCTGAAAATTATGGTAGTTTTCATGGTAATGATGGTGATCTTAGTAGCATTTTTAGTAC CAACAATTCTATCCTAGGAAACTTAGGTCAAGTTCCTCACCGAAATTTTCTAGGCTATAACAACAATTCACAATCCTCTTATAGCTCTTCAAATAGTGTA AGAAGTAGTATAGAAGTGCATTTGGACTCTCCAAACAGTATTGTTCAGATGCCTGATCTGAACAGTGAGAATCAATCCATTTGCCAATTTCAAAAGGGTG TTGAGGAGGCTAGTAAGTTTCTTCCAAGTGGAAATCAGCTCTTTGCTAATTTGGATGTAGCTAATTTTTCAAGACTAGCGCCTAAAGTGGGGATCGGGAC TGATAAGTCTCCGGTTAAGGTGGAGAAGGATGAGGGGGAGTCTTCTCTTGACGGATCGAAGGGAAGGAAGCATCCTCACATGGAAGAGGAAGATGTTGAA GAAAATAGAAGCAGCAAGCAAGCTGCAGTTTACTCAGAACCTACGTTGCGGTCGACTATGATGGACATAATCCTGCTTCATAGTACAGGAGATGGTAAGG ACCATTATATGGCTCGTCGGGAGGCTTTGCAGAATAAGAACAACAAGATAGTGCTGCCAAATGGTAAATCAAAAGCTTCCAATAGCGGTAAGGGACGTGG TGGTAAGAAACAAAATGGGAAAAAGGAAGTGGTCGATTTGAGAACACTTCTTATTCTTTGTGCACAAGCTGTTGCAGCGGATGACAATAGAAGTGCACAT GAGTTTCTAAAACAGGTCAGACAGCACTCAAGTCCTTTTGGGGATGGAAATCAGAGGTTGGCTCATATCTTTGCCGATGGCCTTGAGGCACGCCTGGCTG GTACCGGAAGCCAAATTTATAAAGGACTTGTAAGTAAAAGAACGTCAGCTGCTGATTTTCTGAAAGCTTATTATCTGCTCATTGCAGCTTGCCCTTATAG GAAGATGTCTAGTTTTGTTTCAAACGTCACAATAAGGAAATCTTCAACAAATTCAATGAGGGTCCATGTTATAGATTTCGGTATCCTTTATGGTTTCCAG TGGCCTACTTTTATACAGAGACTTTCATGGAGACCCGGAGGACCACCAAAACTTCGGATTACAGGAATAGACTTCCCGCAACCTGGTTTCAGGCCTGCAG AAAGAATTATTGAAACTGGACGCCGCTTGGCAGCTTATGCTGAAAGTTTTAATGTGCCATTTGAGTATAATGCCATAGCGAAAAAATGGGAAACAATTCA ACTCGAGGAACTTAAAATTGATAGGGATGAGTACCTTGTTGTTACCTGTTTTTATAGAGGTAAAAACTTACTTGATGAATCTGTCGTAGTAGACAGTCCA AGGAACAAATTCCTCAGTTTGATAAGGAAAATCAACCCAGATATATTCATTCATGGCATTCTTAATGGAGCCTTTAATGCCCCTTTCTTTGTTACTAGAT TTCGGGAGGCACTGTTTCACTTTTCTTCACTATTTGATATGCTCGATACTATTGTGCCTCGTGAGGACTGGGAGAGGATGCTAATTGAGAAAGAGGTACT TGGGAGGGAAGCATTGAATGTTGTGGCATGTGAAGGCTATGAGAGAGTAGAGAGGCCCGAGACCTATAAGCAGTGGCAAGTCCGTATTCTAAGGGCCGGA TTTTCGCAACTAGCTTTTGATAAAGAGATAGTACAGACAGCAATGAAGAAAGTAAGGTCCAGCTTCCACAAAGATTTTGTAATGGATGAAGATAGCCAGT GGTTGTTGCAAGGTTGGAAGGGACGAATCATTTACGCACTTTCTTGTTGGAAACCTGTGTGACTAACTAAGGTGGCTCTAGTGCATTTCAATTGAGTCTT GTGAATCAGTTTAACATACGAGGACCTCGGGACATGCCTAATATGTTTGGTTAATGATCAAAAGTGAAGGTTCATGCTGTGAAGTTAGTTGGATAGTACA TGGTCACTGAATAGCCTGGTAAGAAAGCAAACCATGTTGTAACCATTTTTTGTCGCAGATGTCGTTAGCTCGTACTCTTAGATCAGTCCGGAAGTTCGTA GTAGTCTGATAGCTAAATTGAGGGTTGTCTTATAAACATGATCCAATTTATTGTTGCTGATTAGTTTCGCATGTATAAGTCAAAACCTTTTATTGCTTTT ACTGATTTTGAGGTTTCTATATCAACCCTTCTGATAGTTTATGAACCTGAAGATAATAACTTACTAAGGAATATTTATTTTTGGAGAAATACTTCATGCT AACCACATAGTTCACTTCGCGGTCACACACCGGATTTCATGCCGATATTTGTGATGTACCGAAACCAAGTTTAAGCAGATCCAGCCAATGTAGCTTAGAT GCTGTTGTTTGTAGATGATTTATCTGAACATTTTACTTAATGGGATAAGAGCCTCCTTTTTTTGTACAATGGTACCAAAGTTTGAACCTATGATATTGCA TACCATTCAAAATCTTTCACTCCTAGTTCATTTCTAGTAGCTTATTGGAATCTGATCAAAAGTAATGCTATTTCTACAACTAGTCTTCACAAAGTGTAAA GACTTAATTTCAATTAATTGTGAGTGAAAATGTGCTTTAAGTTTTAACATTATCATGCAATCTTAGGATGTCACAGCACTAA
• Tissue: pods
• Gene name: LI_gene_139620;
• Additional information: details;

Expression of Ll_transcript_469448

FPKM

• PAB: 0.7
• PNAB: 0.9
• PS1: 2
• PS2: 0.4
• PS3: 1.6
• PW1: 1.7
• PW2: 2.2
• PW3: 1.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_469448

• Blastp: Scarecrow-like protein 9 from Arabidopsis with 51.38% of identity
• Blastx: Scarecrow-like protein 9 from Arabidopsis with 50.65% of identity
• Eggnog: transcription, DNA-dependent(ENOG410YMPH)
• Kegg: Link to kegg annotations (AT2G37650)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019414011.1)
• Pfam: GRAS domain family (PF03514.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;