Id Trinity | TRINITY_DN45423_c0_g1_i3 |
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Name Transcript | Ll_transcript_469454 |
Sequence | CACTTTCTCTCTCCTTTCTCTCTCTCTAGAACTCACTCAGTCACTCTTCTCTTCGTTGCTGCTACTTTTCTCTCTTTGGAACTTGTGATGTGTGTCTTTC TGAGGACTTTCTGTTCCTGAAAGGGAAGCCAGTGGTTTATAAACAAGAACGGCTACTGTTGATGATTGTTCAGTAAATCAGTGCTAAAGTTTGGTTTTAT ATTAAAAATCTTGCAGAATAGATGATAATGGACCCAAGTCTTGATCGGATTAATGGTTCCTTAAATGAAAACCGGTTTGGGAATCAGTCTTTGCCAATTC TGCAGAATCAGAGATATGAAAATGGTTTCTTTGATCAAACTAGGGAATTTGGTTACCTTCAGTCCAATCTTATGCCTTCTGATACACCTTCATCCTCAAT TTTGACACACGAGGAACCTTCTCTAGAGGACTGTGATTTTTCCGATGCAGTTTTGAGATACATTAGTCAGATCCTCATGGAAGAAGATATGGAAGATAAG ACAGACATGCTTCAGGATTCTTTGGATCTTCAAGTTGCTGAGAAATCATTCTATGAGGTAATAGGCGAAAAGTACCCGCATTCGCAATTAGGAAATCAGA GCTTTATTAATCCAAATGATGGAGGTGGAGATTATAACTTTTCTGAAAATTATGGTAGTTTTCATGGTAATGATGGTGATCTTAGTAGCATTTTTAGTAC CAACAATTCTATCCTAGGAAACTTAGGTCAAGTTCCTCACCGAAATTTTCTAGGCTATAACAACAATTCACAATCCTCTTATAGCTCTTCAAATAGTGTA AGAAGTAGTATAGAAGTGCATTTGGACTCTCCAAACAGTATTGTTCAGATGCCTGATCTGAACAGTGAGAATCAATCCATTTGCCAATTTCAAAAGGGTG TTGAGGAGGCTAGTAAGTTTCTTCCAAGTGGAAATCAGCTCTTTGCTAATTTGGATGTAGCTAATTTTTCAAGACTAGCGCCTAAAGTGGGGATCGGGAC TGATAAGTCTCCGGTTAAGGTGGAGAAGGATGAGGGGGAGTCTTCTCTTGACGGATCGAAGGGAAGGAAGCATCCTCACATGGAAGAGGAAGATGTTGAA GAAAATAGAAGCAGCAAGCAAGCTGCAGTTTACTCAGAACCTACGTTGCGGTCGACTATGATGGACATAATCCTGCTTCATAGTACAGGAGATGGTAAGG ACCATTATATGGCTCGTCGGGAGGCTTTGCAGAATAAGAACAACAAGATAGTGCTGCCAAATGGTAAATCAAAAGCTTCCAATAGCGGTAAGGGACGTGG TGGTAAGAAACAAAATGGGAAAAAGGAAGTGGTCGATTTGAGAACACTTCTTATTCTTTGTGCACAAGCTGTTGCAGCGGATGACAATAGAAGTGCACAT GAGTTTCTAAAACAGGTCAGACAGCACTCAAGTCCTTTTGGGGATGGAAATCAGAGGTTGGCTCATATCTTTGCCGATGGCCTTGAGGCACGCCTGGCTG GTACCGGAAGCCAAATTTATAAAGGACTTGTAAGTAAAAGAACGTCAGCTGCTGATTTTCTGAAAGCTTATTATCTGCTCATTGCAGCTTGCCCTTATAG GAAGATGTCTAGTTTTGTTTCAAACGTCACAATAAGGAAATCTTCAACAAATTCAATGAGGGTCCATGTTATAGATTTCGGTATCCTTTATGGTTTCCAG TGGCCTACTTTTATACAGAGACTTTCATGGAGACCCGGAGGACCACCAAAACTTCGGATTACAGGAATAGACTTCCCGCAACCTGGTTTCAGGCCTGCAG AAAGAATTATTGAAACTGGACGCCGCTTGGCAGCTTATGCTGAAAGTTTTAATGTGCCATTTGAGTATAATGCCATAGCGAAAAAATGGGAAACAATTCA ACTCGAGGAACTTAAAATTGATAGGGATGAGTACCTTGTTGTTACCTGTTTTTATAGAGGTAAAAACTTACTTGATGAATCTGTCGTAGTAGACAGTCCA AGGAACAAATTCCTCAGTTTGATAAGGAAAATCAACCCAGATATATTCATTCATGGCATTCTTAATGGAGCCTTTAATGCCCCTTTCTTTGTTACTAGAT TTCGGGAGGCACTGTTTCACTTTTCTTCACTATTTGATATGCTCGATACTATTGTGCCTCGTGAGGACTGGGAGAGGATGCTAATTGAGAAAGAGGTACT TGGGAGGGAAGCATTGAATGTTGTGGCATGTGAAGGCTATGAGAGAGTAGAGAGGCCCGAGACCTATAAGCAGTGGCAAGTCCGTATTCTAAGGGCCGGA TTTTCGCAACTAGCTTTTGATAAAGAGATAGTACAGACAGCAATGAAGAAAGTAAGGTCCAGCTTCCACAAAGATTTTGTAATGGATGAAGATAGCCAGT GGTTGTTGCAAGGTTGGAAGGGACGAATCATTTACGCACTTTCTTGTTGGAAACCTGTGTGACTAACTAAGGTGGCTCTAGTGCATTTCAATTGAGTCTT GTGAATCAGTTTAACATACGAGGACCTCGGGTATTGCAGTTACCTATTTCTCAGTTGTATTCAATAACTCTGGTTTTCTTCATTGTTTATCAAATTTTGA TCTAACTCTAATGTGAAAATTGAATAGGACATGCCTAATATGTTTGGTTAATGATCAAAAGTGAAGGTTCATGCTGTGAAGTTAGTTGGATAGTACATGG TCACTGAATAGCCTGGTAAGAAAGCAAACCATGTTGTAACCATTTTTTGTCGCAGATGTCGTTAGCTCGTACTCTTAGATCAGTCCGGAAGTTCGTAGTA GTCTGATAGCTAAATTGAGGGTTGTCTTATAAACATGATCCAATTTATTGTTGCTGATTAGTTTCGCATGTATAAGTCAAAACCTTTTATTGCTTTTACT GATTTTGAGGTTTCTATATCAACCCTTCTGATAGTTTATGAACCTGAAGATAATAACTTACTAAGGAATATTTATTTTTGGAGAAATACTTCATGCTAAC CACATAGTTCACTTCGCGGTCACACACCGGATTTCATGCCGATATTTGTGATGTACCGAAACCAAGTTTAAGCAGATCCAGCCAATGTAGCTTAGATGCT GTTGTTTGTAGATGATTTATCTGAACATTTTACTTAATGGGATAAGAGCCTCCTTTTTTTGTACAATGGTACCAAAGTTTGAACCTATGATATTGCATAC CATTCAAAATCTTTCACTCCTAGTTCATTTCTAGTAGCTTATTGGAATCTGATCAAAAGTAATGCTATTTCTACAACTAGTCTTCACAAAGTGTAAAGAC TTAATTTCAATTAATTGTGAGTGAAAATGTGCTTTAAGTTTTAACATTATCATGCAATCTTAGGATGTCACAGCACTAA BLAST |
Tissue | pods |
Gene name | LI_gene_139620; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_469454
Blastp | Scarecrow-like protein 9 from Arabidopsis with 51.38% of identity |
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Blastx | Scarecrow-like protein 9 from Arabidopsis with 50.65% of identity |
Eggnog | transcription, DNA-dependent(ENOG410YMPH) |
Kegg | Link to kegg annotations (AT2G37650) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019414011.1) |
Pfam | GRAS domain family (PF03514.13) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |