Ll_transcript_469910

• Id Trinity: TRINITY_DN45431_c0_g1_i15
• Name Transcript: Ll_transcript_469910
• Sequence: AAAATAATTATCCGATTAAAATATTCTTGTTCTAAAATGAAGAATAAAATAACTTAGATCCTCTTCATCAATACACTAACATCTAAACCCTTTCTCCTGC AACACTGATCTTCTCAGCCGTGCCACAACCGCGCGCACGTTCGCCGCCGCACCACCGTACACCGCCGCATCTCTGATTTTCCGAAGTTGACAGAACTGAT TCTTTTCTTTATTGTTTATCATGGTTTTATTGAAATTTTGGTCATACGTAATATATTGAATAAAGTTTAAAAAGGAACTGTCACTGAAGAAGACAGAGCA CGATGGGATTGAATTCAAAGTCTACAAAGTGAGTGAATGCTTTACAATTATGAAACCCTATATAGGCTTTCATTAAGTTAGACTCTTTTCCAGTCAGCTT AATTGTTTAAGCTTTGCGGAAAGATTCCATCGATCAGAATCTGATTAACACGAAGAAAAGGTGCTGGTATCAGAATCAGAATGCCAGAGGTTAGGATCAT AGCCAAGAATTTCATGGACATGGTGGCTTCCATGCCTGCTATGAAGCTCGACAAGCTGTACGAAAATGGATTCATCTGTGAAGCTATTCTAAGGTCACTA CCGCCCCTTGCAAAGAAATATGTCTTACAGCAGCTGCATATTGATGTGCCAGTGGCAGCTAAACAATTGGAGGAGTGGGTGCTTCCAGATGGATTTTCAA AGCACAGAGTAGCCATTGATAGATTGGTTCAATTGAGAGTTTTTGTTGAAGCCGTTGACAGGAAGAATGAAAAGACTTACAAAGTTACTCCAACATTTCA GAGGAGTCTCCAGAAACTTTTAGTACATGGTGGAACTTTGCCAAGGGAACCAATGGCTTCTAATATTACTGTGAGGCTGCCAACCTTAGAGGATCTTGAG GCTTGGGCTCTGGAACAATGGGAGTGTTTCTTGTTGCAACTTATAAGCTCAAGTCAAGTTGAAAAGCCCTCAAATATTAGCTCTTCATTAATGAAAGTTT TCCAGCGGCGTCTATTGAGTCAAAGAGACAGAGATGCACCAAAATTAACTGAAAGTGGATTTCAGTTCTTGCTGATGAATACAAATGCACAGCTTTGGTA CATCATCAGAGAATATATCTCTAATTCTGAGGAGAGAGGTGTTGATGCAGCTGATTTGATCTCATTCATGTTGGAGATTAGTTTTCATGTCATTGGGGAG GCATATAATGTAAACACACTGACCAATTTCCAGAGGAACATAATTAAGGACCTAGCAGACCTTGGACTGGTCAAACTCCAACAGGGCAGGAAAGAAAGCT GGTTTATACCTACGAAATTGGCAACCAATCTGTCAGTGAGCTTGGCTGATTCATCATCTAGAAAAGAGGGATTTGTGGTTGTGGAAACCAATTTTAGAGT TTATGCTTACTCTACCTCAAAATTACATTGTGAGATATTGCGGCTGTTCTCAAGGGTAGAGTATCAACTTCCAAATCTTATTGTTGGAGCTATTACAAAG GAAAGCTTGTATAATGCTTTTGATAATGGCATTACTGCAGAGCAGATAATCAGTTTCCTTCAACAGAATGCACATCCTCGTGTTGCACAGAGAGCACCAT CTGTGCCAGAAAATGTCACAGATCAGATTAGGTTGTGGGAATCAGATCTAAATAGAGTTGAAATGACAGAATCATATTACTATGACGAGTTTCCTTCCAG GGACATATTTGAAGGTGCATGTGACTGTGCCAGAGAATGGAATGGTTTGTTATGGGAAGATTCAAAGAAGATGCATATGGTGGTCAAGACCGAGGTACAT CCTTATGTGCGCGATTATTTACGTCGCCAAAAGTAGCAGGAAAGGCAAGACAAACTGATGCTTCCTCATGCTCCTGCCAATATGCAAGGGAAGAAACATG GAAAATGTGTATTATTCTGTGCTCTTTCAGAAAAAGGAAACAGGAAGAGAGGAAGCAATGTGGTCACACTTACACACCTAGCAACCACTTTTTTTTGTGT TCCATAATATATTGAAATGAACAAAAATTAGAATTTTTTGGGGTCGAAGAAGTAGATTTTTTTGTTCTTTGTTTTGTTATAAATAAACCAAAATAACATG TTGCTTGATTATCTATGCGGAAGAAACATTATTAAAAAAAA
• Tissue: pods
• Gene name: LI_gene_139636;
• Additional information: details;

Expression of Ll_transcript_469910

FPKM

• PAB: 3.6
• PNAB: 6.5
• PS1: 5.2
• PS2: 4.4
• PS3: 6
• PW1: 4.6
• PW2: 5.2
• PW3: 6.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_469910

• Blastp: RNA polymerase II transcription factor B subunit 2 from Arabidopsis with 75.11% of identity
• Blastx: RNA polymerase II transcription factor B subunit 2 from Arabidopsis with 75.11% of identity
• Eggnog: Transcription factor(COG5144)
• Kegg: Link to kegg annotations (AT4G17020)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019424039.1)
• Pfam: Transcription factor Tfb2 (PF03849.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;