Ll_transcript_469827

• Id Trinity: TRINITY_DN45435_c0_g1_i12
• Name Transcript: Ll_transcript_469827
• Sequence: TACTCATGAGAGGATTATGAAGTCTTCTATTATCCTTCATTTTTATCCAAAGCTCAACTCTTAAACCTACACTAAAGTTTAGACTTCTGGAAGGCACACC TCCATGCAAGGTGCTAGTTTTGATTCATTTGGAAAACATTATCATTAACACAAAGAAAATTTCAAACAATGAAGCGGGCTATCTCGATGGAATGCTTAGA GGGAAGAACTGTAGTACAACTTGAAAATGCTAGCCTACTTGGACCCTCTTCATTTCAAAGAAAAAGCCTATCTTTTGCAGAGGTTTCGCCAATTGATCAT GACTGTGAGAAGTTCTCTCAAGATGTAGTAAGAAGTAAGGTGCTTAGCAGCATAAAAGTTGTAGTCCTTTCCACCAAGATAAACTTACTCATGCCTTTTG GCCCCATGGCAATTTTGGTAGATAATTTGTTTGATAGTCATGGATTGGTCTTTCTTTTTTGCTTATTGGGCATCATACCCTTGGCAGAGCGTTTAGGCTA TACAACAGAGCAACTAGCTTTGTTTACTGGACCTGCAGTTGGAGGTCTTTTATATGCCACATTTGGAAATGCAACAGAATTAATCATATCAATACATGCC CTGAAAAGTGGTTTGATTTATCTTGTTCAACAATCACTACTAGGCTCAATATTGTCAAACCTGCTGCTAGTGCTTGGATGTGCATTATTTGCCGGTGGAG TAGTGTTTTATAAGAGAGAACAGGCATTTAACCGTGCAGATACAACTGTGGATTTTGGATTACTATTGATGGCAGTAATGGGTCTGATATTTCCTGCAGT TCTCCACGCTACACATACAGAATTAGAAAATGAGAAATCTCAGTTAAATCTTTCAAGATTTACAAGTTGCATTATGCTTGTGGCTTATGTTTGCTATATA GTGTTTCAAGTGAAGACTCAGAAGAATTTACAAGCCTTAGTCCAAGAGGATGGAGGTCTCAATAAAGAGACTTCAGATGATGCAGAAGTCCCTGAGATTT CTATGTGGGAATCAATGATATGGCTAGCAATCTTAACTGGAGGTATATCAGTCTTGTCAGAATACTTGGTTAAAACCATAGAGGGGGCATCAAAAGAGTT GAAAATGCCTGTGGCATTTCTTAGTGTTATTCTTCTTCCTATAGTTGGGAATGCGGCAGAACATGCTGGATCCGTAATGTTTGCTGTCAAAGACAAACTT GACTTATCTCTTGAAGTGGCTGTAGGATCTTCAATACAAATATCAATGTTTTTGATTCCTTTTTGTGTGGTTGTTGGATGGATAATTGACTGTCCTATGG ACTTGAATTTTCAACCTTTCGAGACTACTACACTCTTCATGTCTGTTATCATAGTTGCGTTCTTGTTGCATAACGGAACCTCGAACTACTTCAAAGGAAT AATGCTCATTCTTTGCTATTTGATAGTTTCCGCAAGTTTCTATGTGCATACTGACCCAGCCCCAATTGGTGGTAAGCTATGAATCCCTTCTCCATCTTAA ATAGAACACATGCTTCAATTAAGTATGCTATATACAAGTTAAATTCGTGCAGTTTCATTTTTCCTTAACAATTGAAATGTTTTTGCTTTTGATTTACTAG ATCTAATTCGATGTTGATATTATATGATCATCATTTTCTTAAGTATATTTCTATCTAATCCTATTTTTCCTTTTTCTACCTCACAACAATAATTCTAACT TTAATGTTCCACTCATATGAATTACACATTCCCTAGCAGTTTAGTTTATTACTTATCTTGCATTCAACTCTACAACAAAATTAGGTTATGTTAAACCATC TTTGGAAATAAGTAAGGTCTGTTTTTGTGAAATATATATTGATTAAGGTCTGATATATCAATTTGTATATTATTTTTAAAAATACCTCATTAATATTTGA TTTTTGCAGAAATAAATCCGTTGACCGCTAATCCTTAAGATGGTTCATAATTTTTATTTTTTTCACTCTATTTTTCCTGGAGAGAGAAGTGAGACCAAAT CTGTAATACTGTTACATAATTAACGTATTATTAAGAACCCATGTATTCATTTACTCATCCAAAATCTTGTTTAAATAGTTGATTTGGTCATACTTAAGTT TCAGCTGATTTTGCACATGAGATTTTAACTGTACACAACTACACATAAATCAACAATTTCCGCTTGTAATTTTCATTTGGATTAAACTTTGGGTCTCTAG TTTATATTTTCATATACAAAA
• Tissue: pods
• Gene name: LI_gene_139654;
• Additional information: details;

Expression of Ll_transcript_469827

FPKM

• PAB: 1.3
• PNAB: 0
• PS1: 0
• PS2: 0
• PS3: 0.2
• PW1: 0
• PW2: 0
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_469827

• Blastp: Vacuolar cation/proton exchanger 5 from Arabidopsis with 63.34% of identity
• Blastx: Vacuolar cation/proton exchanger 5 from Arabidopsis with 63.34% of identity
• Eggnog: Calcium Proton(COG0387)
• Kegg: Link to kegg annotations (AT1G55730)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019455592.1)
• Pfam: Sodium/calcium exchanger protein (PF01699.23)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;