Ll_transcript_469787

• Id Trinity: TRINITY_DN45449_c0_g1_i3
• Name Transcript: Ll_transcript_469787
• Sequence: CGTGAAGAAAACCGTCGTATCCGGTTTTAAAAGGAACGCTTAGGTTTAGGTTCGATGTAATAAATGAAATCAATATTTAATGTTGTACAGTTGAATTCTA CCATTTCTTAATCATCTCTTCTCTCTTACACACTTTTTTCTTTCACTCCATCGCTGCCATGTCTTACAGGGTTTGCAAGTTCTATGCCCGTGGAACATGT TTGAAAGGGGAGCAATGTGATTTTGTCCATGAGAGAAAGGATTCACCATCTGATATTTGCTCATTCTTTCAGAAAGGATCCTGTGCTTATGGTAGTCGAT GCAGATATAAGCATCTCAAAGCTTCCCAAGCATCATCTTCTGTGTCATCTTCAGAAAATGGACACCAACCTTTGGCTTCAGATTCTTCTGTCACTCGCGC TGCTAAAGGAACATCAAGTTGGATTCCAAAGACTACGAAATTGTCTTCACCCGACAAGCGTGCAAGGAATTCACAACACAAGCACCAGATCTCCACGGGG AATGATGATGTTGGTGAATCCAGTACTCGAGGTGCTATACTATCAAATCATTTATTTTGTCAATTTGCTGCTGCTGCCTGCCCCCTAGGAGATAAATGTC TCCGTGTACATGGAAATCAATGCTTATACTGTAGAAAACATTGCTTGCATCCCACTGATCGAAAGGAAAAAGAAAATCATTTGAGGACTTGTGAGAAAAA GGCAAAATACCTTCAGGCTTTGAAATTTAGTCAAGAAATAGAATGCAATGTGTGTCTCGACCGTGTTCTTTCCAAACCTACACTAGCTGAATGTAAGTTT GGGGTGCTTCCTGAATGCAACCATGCTTTCTGTTTGTCATGTATCCGCAATTGGCGTAATAGTGCTCCAATCTCTGGATTTGAGCAGAGTAATAATGCTA ATACAGTGAGAACCTGCCCTGTTTGCCGCAAACTGTCATATTTTGTCATTCCAAGTGATATTTGGTATTCTACAAATGAAGAAAAACAGGAAATTATTGA CAACTACAAGGCAAACTGCAGGTTGATTGATTGCAAACATTTCAACTCCGGAAATGGGAACTGCCCATTCGGGAATAGTTGTTTCTACAAGCATACTGTG AAGCCTGGCTCATACACATGGATACATAACAGACCACCATCTCAGCGCAGACCAAACAGCTATGATATGCATGACATGTTGGATATGCTCAGCGAAGTTG ATTTATCAAGTGGGGAGCTTTACTCCATCATGAGAGACTCGGAGTTTTTCGATGATATGGATCCATTCCAGATGATGGCTATATCAGATGCAATGGGTAG CGGGGATGGTCCTTGTCTGGGTCCTTTTGATTCTGACGATGAAGAAGTAGACATGGATTTTTTCCGGATGGCTAATTTGTCAGAGGCATTGGCTTCTGGT ATCGACGACTTTGGCCCGGAAGATTTTGACAATGATGAAATAGATCCTATGGAGGCAGCATTACTGTCAATGATGATGCATTCTAATATTGAAGAAGAGG ATGAAGAAGAAGACAGTGATGAAGACTACTAGATTTACTTGGTTCACATGAAAACCATCTTTAGCCAAGTTTTTGAAGTAGTTGGTATTTGGATTATTTG CCATTTTGTATATTTACTCCTATCATACTATTGAAGGAGTTTTGGCTTGATGATTTTTGTGTAAGTCCATTTTGCTGGTTGAATTTTGAGTACCCTTTTG AAAGGGTTGTTATTGTGGTTTGAACATGATAGAACAGTTCTATATCAGCATATCCCGTATCCTATAAAATTGTGTTGGTTCTGGTTGCTATAATGCCATA AACCCTATGGATGTTGGTTTTGGTCTGTGCCGGTATACATCTACTGTCTCACAAGTTATGTTACTACATTTGTTAACAGTTGTGATTGGTCGGGAGAATA GTTAAGCATTC
• Tissue: pods
• Gene name: LI_gene_139679;
• Additional information: details;

Expression of Ll_transcript_469787

FPKM

• PAB: 4.9
• PNAB: 11.2
• PS1: 10.4
• PS2: 10.6
• PS3: 13.2
• PW1: 10.1
• PW2: 14.3
• PW3: 18.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_469787

• Blastp: E3 ubiquitin-protein ligase makorin from Arabidopsis with 50% of identity
• Blastx: E3 ubiquitin-protein ligase makorin from Arabidopsis with 50% of identity
• Eggnog: Ring finger protein(ENOG410XRM0)
• Kegg: Link to kegg annotations (AT3G08505)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019425357.1)
• Pfam: Zinc-finger containing family (PF15663.4)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;