| Id Trinity | TRINITY_DN45449_c0_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_469790 |
| Sequence | CGTGAAGAAAACCGTCGTATCCGGTTTTAAAAGGAACGCTTAGGTTTAGGTTCGATGTAATAAATGAAATCAATATTTAATGTTGTACAGTTGAATTCTA CCATTTCTTAATCATCTCTTCTCTCTTACACACTTTTTTCTTTCACTCCATCGCTGCCATGTCTTACAGGTTTAAGGTTTTGATGTGTGCCAAGGAGGGT TACCATGCTATTTGAATGGCAAGGCTTGAAATGAATGATTAAAGCTTATTGGGGTCAATGTAGTGCTTGGAATTTTTAAAATTAAGGGTGAATATGTAAG GTTTCTGTTTGGCCTCAGATGCCAGAATGGTGTGAAGAAGTGAAGAAACGAGACAGGCTCTATAAGTACACCTCCTGGCCGCTATTGGGACGTGATACAT GTTCGTGTAATCATACATGGCCTGGCCACTTGTCGATCGACTTTTGTGTAGTTTTTCATACTTTTCTGGCCTGCCCAATACATGTACTCCTTTTTTTCTG AATCAAAAGACATGAATAATCTTGTCTAGAGCTTGTTCTTAGTGCATAGTGTGAGAGTGACTCTCATGGGTTCCTATCAAACCAGTGACTTGTCAAGGCA CCTTTCCTTGTGTTGTTCAAACCAAAACTTATCGAGAAATCATTTTCTTGTATTCAAAAGGCTTATCACTCCCACTGAGTGTGAAGCTTCTTATCACCGT CTTTTGTCTAATTTGTTTTCCCTTATTTTATCATTTTTGTTTTCCTTCATAGCCATAGAATTAAGTCATCACAAAACCCATTAGTTGTTATTTTTCTTAA TGAATTTCGACCTCCATTGGAACATAAACAAGTGATATTTAGTTTTTCTTATTATTCCTAATCCTAGCACCTCCCTAATCAAGAACGGTCTGAAGTATTT ACCTATGCAAGGTGGGGTCTAATCAGGTTTTTACATAATGCTCGTAAATGGTTTGCAAGTTCTATGCCCGTGGAACATGTTTGAAAGGGGAGCAATGTGA TTTTGTCCATGAGAGAAAGGATTCACCATCTGATATTTGCTCATTCTTTCAGAAAGGATCCTGTGCTTATGGTAGTCGATGCAGATATAAGCATCTCAAA GCTTCCCAAGCATCATCTTCTGTGTCATCTTCAGAAAATGGACACCAACCTTTGGCTTCAGATTCTTCTGTCACTCGCGCTGCTAAAGGAACATCAAGTT GGATTCCAAAGACTACGAAATTGTCTTCACCCGACAAGCGTGCAAGGAATTCACAACACAAGCACCAGATCTCCACGGGGAATGATGATGTTGGTGAATC CAGTACTCGAGGTGCTATACTATCAAATCATTTATTTTGTCAATTTGCTGCTGCTGCCTGCCCCCTAGGAGATAAATGTCTCCGTGTACATGGAAATCAA TGCTTATACTGTAGAAAACATTGCTTGCATCCCACTGATCGAAAGGAAAAAGAAAATCATTTGAGGACTTGTGAGAAAAAGGCAAAATACCTTCAGGCTT TGAAATTTAGTCAAGAAATAGAATGCAATGTGTGTCTCGACCGTGTTCTTTCCAAACCTACACTAGCTGAATGTAAGTTTGGGGTGCTTCCTGAATGCAA CCATGCTTTCTGTTTGTCATGTATCCGCAATTGGCGTAATAGTGCTCCAATCTCTGGATTTGAGCAGAGTAATAATGCTAATACAGTGAGAACCTGCCCT GTTTGCCGCAAACTGTCATATTTTGTCATTCCAAGTGATATTTGGTATTCTACAAATGAAGAAAAACAGGAAATTATTGACAACTACAAGGCAAACTGCA GGTTGATTGATTGCAAACATTTCAACTCCGGAAATGGGAACTGCCCATTCGGGAATAGTTGTTTCTACAAGCATACTGTGAAGCCTGGCTCATACACATG GATACATAACAGACCACCATCTCAGCGCAGACCAAACAGCTATGATATGCATGACATGTTGGATATGCTCAGCGAAGTTGATTTATCAAGTGGGGAGCTT TACTCCATCATGAGAGACTCGGAGTTTTTCGATGATATGGATCCATTCCAGATGATGGCTATATCAGATGCAATGGGTAGCGGGGATGGTCCTTGTCTGG GTCCTTTTGATTCTGACGATGAAGAAGTAGACATGGATTTTTTCCGGATGGCTAATTTGTCAGAGGCATTGGCTTCTGGTATCGACGACTTTGGCCCGGA AGATTTTGACAATGATGAAATAGATCCTATGGAGGCAGCATTACTGTCAATGATGATGCATTCTAATATTGAAGAAGAGGATGAAGAAGAAGACAGTGAT GAAGACTACTAGATTTACTTGGTTCACATGAAAACCATCTTTAGCCAAGTTTTTGAAGTAGTTGGTATTTGGATTATTTGCCATTTTGTATATTTACTCC TATCATACTATTGAAGGAGTTTTGGCTTGATGATTTTTGTGTAAGTCCATTTTGCTGGTTGAATTTTGAGTACCCTTTTGAAAGGGTTGTTATTGTGGTT TGAACATGATAGAACAGTTCTATATCAGCATATCCCGTATCCTATAAAATTGTGTTGGTTCTGGTTGCTATAATGCCATAAACCCTATGGATGTTGGTTT TGGTCTGTGCCGGTATACATCTACTGTCTCACAAGTTATGTTACTACATTTGTTAACAGTTGTGATTGGTCGGGAGAATAGTTAAGCATTC BLAST |
| Tissue | pods |
| Gene name | LI_gene_139679; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_469790
| Blastp | E3 ubiquitin-protein ligase makorin from Arabidopsis with 49.68% of identity |
|---|---|
| Blastx | E3 ubiquitin-protein ligase makorin from Arabidopsis with 49.68% of identity |
| Eggnog | Ring finger protein(ENOG410XRM0) |
| Kegg | Link to kegg annotations (AT3G08505) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019425357.1) |
| Pfam | Zinc-finger containing family (PF15663.4) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |