Ll_transcript_469793

• Id Trinity: TRINITY_DN45449_c0_g1_i9
• Name Transcript: Ll_transcript_469793
• Sequence: CGTGAAGAAAACCGTCGTATCCGGTTTTAAAAGGAACGCTTAGGTTTAGGTTCGATGTAATAAATGAAATCAATATTTAATGTTGTACAGTTGAATTCTA CCATTTCTTAATCATCTCTTCTCTCTTACACACTTTTTTCTTTCACTCCATCGCTGCCATGTCTTACAGGGTTTGCAAGTTCTATGCCCGTGGAACATGT TTGAAAGGGGAGCAATGTGATTTTGTCCATGAGAGAAAGGATTCACCATCTGATATTTGCTCATTCTTTCAGAAAGGATCCTGTGCTTATGGTAGTCGAT GCAGATATAAGCATCTCAAAGCTTCCCAAGCATCATCTTCTGTGTCATCTTCAGAAAATGGACACCAACCTTTGGCTTCAGATTCTTCTGTCACTCGCGC TGCTAAAGGAACATCAAGTTGGATTCCAAAGACTACGAAATTGTCTTCACCCGACAAGCGTGCAAGGAATTCACAACACAAGCACCAGATCTCCACGGGG AATGATGATGTTGGTGAATCCAGTACTCGAGGTGCTATACTATCAAATCATTTATTTTGTCAATTTGCTGCTGCTGCCTGCCCCCTAGGAGATAAATGTC TCCGTGTACATGGAAATCAATGCTTATACTGTAGAAAACATTGCTTGCATCCCACTGATCGAAAGGAAAAAGAAAATCATTTGAGGACTTGTGAGAAAAA GGCAAAATACCTTCAGGCTTTGAAATTTAGTCAAGAAATAGAATGCAATGTGTGTCTCGACCGTGTTCTTTCCAAACCTACACTAGCTGAATGTAAGTTT GGGGTGCTTCCTGAATGCAACCATGCTTTCTGTTTGTCATGTATCCGCAATTGGCGTAATAGTGCTCCAATCTCTGGATTTGAGCAGAGTAATAATGCTA ATACAGTGAGAACCTGCCCTGTTTGCCGCAAACTGTCATATTTTGTCATTCCAAGTGATATTTGGTATTCTACAAATGAAGAAAAACAGGAAATTATTGA CAACTACAAGGCAAACTGCAGGTCATTTCTTATCTACTACTACTTATACTACTATTTATATTCCCTCAAACTTGACCTTGAACTGATTTGTTACTTGGCA ATTCCAGTTACGGTTAATTGATGAGAGTGTTTTAGTGGTGATTGTATGGGAAAACATTCCCTGTATCTCATCCCTGCATATGCCCACTACTCCCGTGCTT ATTACACCCTATATTGCACTTCTCCCCTTCCCTACCACACACCATACACCAATAATATACGAAAATACATGAGCACAACTATCCGTACATGTGTTTGTGT GGTATGTTGATGCATTCACTCTTCACATTGTTGTCTAGGTGCATTTTTTTATTGAGTTCGGTACTTCGGTTTAACCAGGTGGCCATCTGACAATTGAAGA GATCTGACTTAATTTTAATAGTAAGAATTTAGATGTTTGATATTCCAGTTTTGCTTACTGTCTTTTATCCAGGTTGATTGATTGCAAGCATTTCAAATCT GGTAATGGGAACTGTCCATTTGGGAATATTTGTTTCTACAAGCATACTGTGAAGCCTGGCTCATACACATGGATACATAACAGGCCACCACCTCAACGTA GACCTAACAATTATGATATGTATGACATGTTGGATATGCTCAGCGAAGTTAATTTATCAAGTGAGGAGCTTTATTCCATCATGAGGGGCTCTGGGCTTTA TAATGATATGGATCCATTTGAGATGATGGCTATATCAGATGCAATGGCCAGTGGGGATGGTCCTTGTTTGGGTCCTTTTGATTCTGATGATGATGAAGTA AACATGGATTTTTCCAGGATGACTTCTTTGTCAGAGGCATTAGCTTCTGGTGTGGACGACATTGGCCCTGAAGATTTTGGAAATGATGAAATGGCTCATA TGGAGGCAGCATTGTTATCAATGATGATGCATTCTAATATTGAAGAAGAGGAGGAAGAAGAATACAGTGATGAATACTATTAAATTTACTTAGTTCTTAT GAAACCCATCTTGAGTCATTTTCTGAGGTAGGTTCCTTTGGGATTTGGATTCAATGACTTTCAGAAATATTGGGCAGTTGAGATTCTTATTCTAGTTTGT GGTATGTTAATTCTCATGTCAATAGTTGGTATTGTGATTATTTGCCATTTTTGTATATTTAATCATATCATACTATTGAAGGAGTTTTGGTTTGGGGTTT GTTTAGTCCACATATTGGTCCTTGAATTTTGATTGCCCTATTGAAAGGGTTACTATTTTGGCTTGAAGATGATAAAACAGTGCTGTGTCTTTCATATATA GCCTATAAAATTTTATATATTGGTT
• Tissue: pods
• Gene name: LI_gene_139679;
• Additional information: details;

Expression of Ll_transcript_469793

FPKM

• PAB: 0
• PNAB: 0.3
• PS1: 0.2
• PS2: 0.3
• PS3: 0.1
• PW1: 0.1
• PW2: 0.2
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_469793

• Blastp: Putative RING-type E3 ubiquitin transferase C3H69 from Arabidopsis with 48.37% of identity
• Blastx: E3 ubiquitin-protein ligase makorin from Arabidopsis with 47.44% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019425357.1)
• Pfam: Zinc-finger containing family (PF15663.4)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;