Ll_transcript_469980

• Id Trinity: TRINITY_DN45453_c0_g1_i1
• Name Transcript: Ll_transcript_469980
• Sequence: GTGAGAACTGTGCTACCTTCTCTTCTTCCTTTCGTTCAAGGTTCCTCCTCTGTCAATGTTGCATGCAGCATCAGCCCCAGCCTTTTGTGCAACCTATCCC CGCAATCTGCATTGTCCTCGTTATATTATAAATCCGTCAGTTAAAGCTAAGTTCTCTGTTCGTTGTTCAGTACCGCAGACAAACAATGAAGCTAAAGTGG AATTCACTCCTTGGCTCATTGTTGGCTTGGGTAACCCTGGCACTAAATACCACGGCACTAGGCACAATGTTGGATTTGAAATAATTGACAGCGTGTCTCG AGCAGAAGGGATTCGGATGAACACGATACAGTCAAAAGCCTTGATTGGAATAGGTTCTATAGGAGAGGTACCAGTTTTGCTGGCAAAGCCTCAAACATAC ATTAATTTTAGTGGGGAATCGGTTGGACCACTTGCTGCATATTATCGAGTACCCTTGCGCCATATTCTAGTAGTTTATGATGAAATGAGTCTCCCAAATG GTGTTTTAAGGCTACAACAAAAAGGTGGACATGGACATCACAATGGATTGAAAGATGTAATTGGCCATTTGGAGAGTTCCCGTGAATTTCCTCGACTTGC CATTGGAATTGGAAATCCTCCTGGAACTATGGATGTAAAAGCTTTTCTTCTGCAGAAGTTCAGTTCCGAGGAGCGAAAGCAGATTGATGATTCATTGGAG CAAGGAGTTGAAGCTGTAAGGACCTTAGTGCTGAATGGGTTCAACCACCATGTGACTAGATTCAATACAACTCAAAAATACAAGTACCATAAAGTTTAAT ATTCCTCAAATGAACCTTAAATTTTGGGCAGAGAAATCCATGGTTACCTACCTTATCTTTTTGGTTGTTTGCTAGCACTCGAGTCTATTGTTCTGATATG TGCATATTTGTATAAAGCTTATCCGTTCTCATTTTATTTTTGTAAAAAAATATTATTAGATGAGGTGAGAAAAGTATATCAGAGAAGTTATCCGTCCAAA AATAAAAAGAAACAGC
• Tissue: pods
• Gene name: LI_gene_139690;
• Additional information: details;

Expression of Ll_transcript_469980

FPKM

• PAB: 3.6
• PNAB: 11.5
• PS1: 9.1
• PS2: 7
• PS3: 9.6
• PW1: 9.9
• PW2: 11
• PW3: 9.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_469980

• Blastp: Chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic from Oryza sativa with 72.56% of identity
• Blastx: Chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic from Oryza sativa with 72.56% of identity
• Eggnog: The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis (By similarity)(COG0193)
• Kegg: Link to kegg annotations (4325801)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019418975.1)
• Pfam: Peptidyl-tRNA hydrolase (PF01195.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;