Ll_transcript_469460

• Id Trinity: TRINITY_DN45456_c0_g1_i3
• Name Transcript: Ll_transcript_469460
• Sequence: GAAAATAATGTGGTAAAGATTTTGACGTTCCCGGTCTGAAATTGAATCTCAACCGGGTTGAACCATCGGCTTTCTCTTTCTCATTACAAAATATTAATTT TCCGGTAACAAACTCTCTCAGATCCCAACTCCATTTCCATTGAAAACAAAATCAAATCACTCTTCAATCACCGAACCAATTCATTTGAATCCAACAATGG ATTCATCACCAACCACACATTCTTCATCTTCACCTTCTTTCTCTTCCTTCATTCACCGAACCTCTTCTTCTTCTTCTCCTCTCTCCAAATCCAACTCCGA CGCTATTCAAAGCCTCTCTTCAATCCTCAACAACCCTCACGCCTCCGATCCCTCCGCCTCCTGGGTCCCCTGGTGGTCCTCCTCCGCCGCCCTCGCTCCT CCCGATTTCAACCCTATAACCGTCAAACCTACTTCTGAATTCACCCGATCCGACTTCGATTCGTTCTTGTCGCCCATTTCTGAACCCTATCATCGATTCC AAGACATTCGGAACCACGAGACGAAGGAGATCGATGATGCTGATGGAAACGGCGTCGTTTCGGGGCAGGGAGAGGCGTTAGTTGCGTGCCTACGTGAGGT TCCGTCGCTTTATTTTAAAGAGGATTTTCGGCTTGAGGACGGTGGGACGTTTAGGGCGGCGTGTCCGTTTTCCAATGTTTCGGAGAATCTCGCGCTGCAG GAGAAGCTGTCGCATTACTTGGATGTGGTGGAATTGCATTTGGTCAAGGAGATCTCGCTAAGGTCCAGCTCGTTCTTTGAGGCGCAGGGGCAGTTACAGG ACTTGAATGCTAAGATCGTGGAAGGTTGTAGCAGGATACGCGAATTGAAGGAGACGATCCGGCTCTTGGATTCGGATTTGGTTGAGAATGCGAGGCAGAT TCAGGAGCTCAATGGCACTAGGACTAACCTCTTGGTGCTTCAGCAGAAATTGAGGCTTATATTATATGTTAATCAAGCTGTGTCTGCTCTCAAATTGCTT GTTGCATCTGCAGATTGTGCTGGAGCACTGGATGTAACTGATGATCTGCAACATTTACTGGATGGAGATGAGCTCACTGGTCTGCATTGCTTTCGTCATC TTAGAGATCACGTTATAGGCTTTATAGAGGCCATAAACAGCATTCTTTCAGCAGAGTTTGTTCGAGCTTCCATACATGATGCTGCAGAAACAGATGTGAT GATTTTATCCAAAGCTAAAGCAAGGGCTTCCCTTCCAATGAATGGAAAGGATGACGAAGTAAAGTTGCAAGAAGAAGACACCGCTAATTTCAAAGACCGT CTTCTTCCTACCGTACTTGGATTGCTTAGAACAGTTAAACTTCCCTCTGTTCTTAGGATCTATCGAGATACGCTAACCGCTGATATGAAGAGTGCGATTA AGACAGCTGTGGCTGAGTTGCTTCCGGTTCTTGCTGCTCGAGGTTCAGATTCAGAGTTCTTTTCCGGAGACAAAACTGTAGATGCAGATGGTGGAGGTGC ATCACTTGCTAGCAAGTTGAGGAGCTTGTCATCTGATTGCTTTGTGCATCTTCTGAGTGCTATTTTCATGATAGTACAGGCACATTTAGTGCGGGCTTCT GAAGTGAAAAAGGCCATTGAATGGATTTTGAGCAACTTTGATGGCCATTATGCTGCTGATTTAGTTTCCCCAACAATTGCGCATGGTTCTGCAGCCTCAG AAATATCCCAAGAAAGTGAGGTTCATGGTACTGCCTTTTTACCTTATTCACCTCAGCGGAGTGTTGCCAAGGGTCCTACTTTTCCAGGAAAAGCAATTGA TGCCACAAGCTCCTCTAACATGTCAAAGAATTTCAGAGCTGATGTATTGCGGGAAAACGCAGAAGCTGTCTTCGCAGCATGTGATTCTGCTCATGGAAGA TGGGCGAAACTTCTTGGAGTCCGTGCAGTTCTCCATCCTAGGTTGAAATTGCAGGAGTTTCTTACGATATACAACATCTCCCAGGAGTTCATTACTGCTA CGGAAAAAATTGGTGGGAGATTGGGATACAGCATCCGTGGGACACTGCAGTCACAAGCCAAGGCTTTTATTGACTTTCAGCATGACTCTCGGATGTCAAA AATTAAGGCAGTGCTTGACCAAGAAACATGGGTGGAAATAGATGTGCCTGATGAATTTCAAGCTATCATCAATTTACTTTTTTCAAATGATGCATTAACT TCTGAGAACCTTAATGGTTCTGAGGATGATAATTCGACAAGTTACAATGATGCTCAGCCGATTGCGTACACTGGACAGTCAAATGATGAACAGAATAATT CCATTGAAGCATCCATTAGCAATGCTGCATCAGATAGATCCAAACCCCTGGATCAGCCAACAGAAAGAAATAGAGGTCATAGTAGGACTCTATCTGCACA GAGTAACCATACTGACACAAAAGACAATAAAAAATCTATTTCTCAGGCTCTTTTCTACAAAGGTGTTGGTTATCACATGGTGAACTGTGGCTTAATATTG CTAAAGATGCTATCTGAGTACATTGATATGAACAACCTTTTGCCGTCACTATCTTCAGAAGTTGTTCACCGTGTAGTGGAAATCTTGAAATTTTTCAACA CAAGAACTTGTCAACTAGTGCTTGGGGCTGGTGCTATGCAGGTGTCTGGTTTGAAGTCCATCACTTCTAAACACTTGGCGTTGGCGAGTCAAGTCATTAG TTTTATCCATGCTATTATTCCTGAAATTCGGCAGATTCTTTTTCTAAAGGTGCCAGAGACTAGAAAGATGTTATTGGTTGCTGAGATTGATCGAGTTGCT CAGGTAATTGCTATATATTTTTGCTACTGACACTTTTATTCCTTTGATGGACGTAGACATATTCAGATGCAATCTTTTTTTGGATATTTCATTTTTGAAT GTTTCATTTGTTGGAAATTATTGCATCCAGTTGATCCTTTTTCCTGGAACTGAATTCTCTAGCCCTCAATGATTTTTTTCACGGTAAGGTTGCCTCTCTT GACACCTGGAGGTCATGGGTTCAAATCATGGTAACGGCCTATTCACTTGCAAGGGTAAGGCTGCATACATCTACCGTCCGCAGACCCCTCTAGGTGGGAG TCTTGTGAATTGGGCTGCCCGTTCTTTTTCTGCACATTTGCCCCTACTGTTATTGTCTAGTTCTCTTATTCCTTAATTTGTATTCCTTTCTTCCCTTTCT TTCCTTACTCTCCTTTGTTATTCTGTTTATTGTTATCTTTACCTAACACATGCCTCTTCTGTATTTATCTCTTATTCACAACTTCGTGATGTGGATGTTT TTTAAGTGGATTTTGAGAATGAAGATGGGTTTTATTTTTCCTTGAGTGTCCAAGCATAATGATAAAACTTCAGTTCTTAGGGTTTGCTTTTGGTGATAAT CTCTTGGGCTTGTAATTCTTTTTAGTTTCTTTTTTTTAGGATACCTTTTGGTTCTTAGTTTTATTTTCAGAATATTTCTCTTGTAACATTGATTACCATT GCATTTTTTGTGGTTTCATTCCAGGATTATAAAGTTCACAGAGATGAAATACATACTAAATTAGTTCAGATTATGCGAGAAAGGTTACTAGTCCATCTAC GTGGGTTGCCTCAAATTGTTGAGAGTTGGAACAGACCTGAGGATGCTGACCAGCAGCCTAGTCAGTTTGCTCGGTCTCTTACAAAGGAAGTTGGATACCT ACAGCGTGTTCTATCTCGAACTCTGAATGAAGAAGATGTTCAAGCGATTTTCAGGCAAGTGGTCATTATATTTCATTCACAAATTTCAGAAGCATTTTCA AGATTTGATATAAGTACTCCTCAAGCACAAAATAGGCTATATCGGGACATCAAACATATTCTTCTGTGCATACGGTCATTGCCATCAGGTGATTTGAGTA AATCCGATACTGCAAACTGGGGGCAGCTGGATGAATTCTCGGTACAAAGATTCGGGAGAGATACTGTTCAGTAAAGCATATTGTAAATTAGTAACTCAAT TGCTTAAGTGGGAAGGCTAACCTACTTTGAAGATTGTGGGAGTGATTTCAACCTTCTTCACGTTGTTGCATTTTGGTGTAACACTGAGTTGAGGCCTTCG ATTGATCTGTGGTAGATATACAAGGTATTGTATCATTTCTGAGCATTGTGCAGCCATGATTGGTTTTTTTAACAGAAGTTTTGTAGCAATCACTGTTGAT ATTCAATTTTTGGTTTCTCCCCATAATTGTAATGTTAAGCTGAGAATAGATATGATTCTGTTGATGATTTGAGTTTCTTTTTTTCATTTTATATCTCTCT TTTGGTGACGGAAATCAATGCATCAGAATGTACACAATTTGAGAAATCTAGTGACATTACTAATCTGTGTTCTGTTCAAGTCAATATTTTCGGTTTCTCT TATAAAC
• Tissue: pods
• Gene name: LI_gene_139698;
• Additional information: details;

Expression of Ll_transcript_469460

FPKM

• PAB: 0.3
• PNAB: 0.1
• PS1: 0
• PS2: 0.3
• PS3: 0.1
• PW1: 0.3
• PW2: 0
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_469460

• Blastp: Vacuolar protein sorting-associated protein 54, chloroplastic from Arabidopsis with 65.6% of identity
• Blastx: Vacuolar protein sorting-associated protein 54, chloroplastic from Arabidopsis with 64.54% of identity
• Eggnog: vacuolar protein sorting 54 homolog (S. cerevisiae)(ENOG410XQ3K)
• Kegg: Link to kegg annotations (AT4G19490)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019417145.1)
• Pfam: Vps54-like protein (PF07928.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;