Ll_transcript_469298

• Id Trinity: TRINITY_DN45474_c0_g1_i1
• Name Transcript: Ll_transcript_469298
• Sequence: CGGAGAAAGAGAAAGAGCGGGAGTGAGAACTAAGAATGAATCCGTCGTCGACGCCAGATCCGTCATCGCCAGCATCACCGTCGGTAGGGTTCAACACCGA CCAGCTTCCACACACCCACACCAGTCACGCCTCCGAAGACGATGAAGCATCCGTCGATCCCAATGTCATTCCAGACGATCCCGAACATGTCCCCGACGAA GACGAAGAAGACGATGGAGAGGATCTTTTCAATGATAATTTCTTAGATGATTATCGGAAGATGGAGGAGCATGATCAGTTTGAATCACTCGGACTCGATG ATTCGATGGAGGACGATAGGGAATTTGACCAGGTCATGCAAGATCGTAGGGCTGCTGAGGTTGAACTTGATGCTCGTGATGGTCGTGTTTCTACTCGCAA CAAACTTCCTCAACTTCTCCATGACCAAGATGATGATGATGATGACAGTTACAGGCCTTCAAAAAGGGCTCGAGCTGATCGACCTCCTCATATGCCAAGT GATGATGATGTTGATGGGATGCAGAGTTCACCTGGAAGGTCACAACGGGGACACTCAAGAGAGGATGTTCCCATGACTGATCAAACTGATGATGATCGAT ATGAGGATGATTATGACCATGAAGGTGAATATGCCATGTATCGTGTTCAAGGAACACTTAGGGAATGGGTTACCAGAGATGAAGTTCGCCGTTTCATAGC TAGGAAATTCAAGGATTTCTTACTGACATATGTTAATCAGAAAAATGAACATGGTGAATTTGAATATGTGCGGCTGATAAATGAGATGGTGTCAGTTAAT AAGTGCAGTTTGGAGATAGATTACAAACAATTTATCTATGTCCACCCCAACATTGCTATTTGGCTTGCTGATGCACCTCAGTCCGTTTTAGAAGTAATGG AAGATGTTGCTAAAAATGTTGTATTCCAATTACATCCAAACTACAAAAATATACATCAAATAATTTATGTTCGCATCACCAACTTACCAGTTTATGATCA GATTCGAAATATAAGGCAGATCCACTTGAATACCATGATCCGAATTGGGGGAGTTGTAACCAGGCGCTCTGGAGTTTTCCCCCAGTTGCAGCAGGTGAAG TATGACTGTAATAAATGTGGGGCAGTTTTGGGGCCTTTTTTCCAGAATTCATATTCAGAGGTGAAAGTTGGATCATGTCCTGAGTGTCAATCAAAAGGAC CATTTACTGTCAACATTGAGCAGACAATTTACAGGAATTTTCAAAAGCTTACACTCCAAGAGAGCCCAGGAATTGTTCCTGCAGGTCGATTACCAAGATA TAAGGAAGTGATACTGTTGAATGATTTGATTGACTGTGCTCGCCCTGGGGAAGAGATTGAGGTAACAGGGATTTATACTAACAACTTTGATTTATCCCTA AACACGAAGAATGGGTTTCCAGTGTTTGCCACTGTTGTTGAGGCGAATTATGTTACAAAGAAACAAGACCTATTTTCTACCTACAAACTTACACAAGAAG ACAAAGAAGAAATTTATAATTTGGCAAGAGACCCCAGAATAGGAGAAAGGATTATCAAGTCTATTGCTCCATCAATCTATGGTCATGATGACATAAAAAC TGCAATAGCTTTGGCTATGTTTGGAGGTCAAGAAAAAAATGTTGAAGGAAAGCATCGGCTGCGAGGAGACATCAATGTTCTTCTCCTCGGTGATCCAGGA ACTGCAAAATCACAATTTCTCAAGTATGTTGAAAAAACTGGGCAGAGAGCTGTATACACCACTGGCAAGGGGGCTTCTGCTGTGGGTCTCACTGCAGCAG TTCACAAGGATCCAGTCACAAGGGAGTGGACACTTGAAGGGGGAGCCCTTGTTCTAGCTGACAAAGGAATTTGTCTTATTGATGAGTTCGACAAGATGAA TGACCAGGATAGGGTAAGTATCCATGAAGCCATGGAGCAGCAGAGTATAAGCATATCCAAAGCAGGAATTGTGACCTCTCTCCAGGCACGCTGTTCTGTT ATTGCTGCTGCAAATCCTGTTGGAGGAAGATATGATTCCTCAAAAACATTTTCTCAAAATGTTGAATTGACTGATCCTATTATTTCTCGTTTTGACATAC TCTGTGTTGTGAAGGATGTGGTTGATCCGGTCACTGATGAAATGCTCGCACAGTTTGTAGTTGACAGTCACTTCAAATCACAGCCCAAGGGTGGTAACAA AGATGACAAGTCCTTTAGTGAGCCCCAAGATGCCTCCATGCCAGATGATCCTGAGGTTACTAAGGCCCTGCTATTTTATAATAATCATATTTTAAGTAAT CTCAGATTGTTGCTCTATATTTCTCAAGTTTTGTTGGCTTGTTTTCAGATACTTCCTCAAGAGCTGCTGAAGAAGTACCTTACATATGCCAAGCTGTATG TGTTTCCAAGGTTGCATGATGCTGACTTGGATAAACTGACTCATGTATATGCTGAACTGCGGAGGGAATCCTCACATGGACAAGGAGTCCCCATTGCTGT AAGGCACATCGAATCAATGATAAGGATGTCTGAAGCTCATGCAAGAATGCATCTTAGACAACATGTCATACAAGATGACGTGGACATGGCAATTCGTGTT CTGCTTGATTCATTCATTTCAACCCAAAAATTTGGGGTGCAGAAAGCTCTGCAAAAGAGTTTCAGGAAGTATATGACTTTCAAGAAGGACTACAATGACT TGCTGCTTTACCTTCTCCGCGGGCTTGTAAATAATGTTTTGCATTTCGAAGAAATTGTTAGAGGATCTGCTTCAGGTCTTACACAAGTAGATGTCAAAGT CGAAGATCTCTCCCGCAAGGCTCAAGAGCATGAAGTTTATGATCTTAAACCCTTCTTCAGCAGCGGTCAGTTTTTAAACGCCAATTTTGTGTTGGATGAA GAAAGAGGAGTGATCATACATCACCTCTTCTAGATGAAATGAAGGAAGAATGCAGCTCTGTTATTCATCAATGGTCCTGAACATAAATTTGAATGTTGAA CTGTGCGTTTCTCTACCATTTATGTAGACATTTGTCTTTTTAGTGGTTTGGGCAGGCCTTTAAAAAACATGGTGTTCGCTGGCCTGTTTGTTGTCTCTTT TCATGAATCAGCTGTTATTTATGCTATCTCTTTGGACTATTAATTTTATGTAGGCCTTTAAATTAATATTTAGAATATTAATTATGTTCTTTTCACTCAA TCTTCAAAATCACATTTTAATAACATGTATAATTTGATTATAA
• Tissue: pods
• Gene name: LI_gene_139739;
• Additional information: details;

Expression of Ll_transcript_469298

FPKM

• PAB: 0
• PNAB: 0.9
• PS1: 0.2
• PS2: 0.2
• PS3: 0.3
• PW1: 0.2
• PW2: 0.1
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_469298

• Blastp: DNA replication licensing factor MCM2 from Oryza sativa with 76.85% of identity
• Blastx: DNA replication licensing factor MCM2 from Oryza sativa with 76.03% of identity
• Eggnog: dna replication licensing factor(COG1241)
• Kegg: Link to kegg annotations (4350526)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019456418.1)
• Pfam: Mini-chromosome maintenance protein 2 (PF12619.7)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;