Ll_transcript_469300

• Id Trinity: TRINITY_DN45474_c0_g1_i3
• Name Transcript: Ll_transcript_469300
• Sequence: CGGAGAAAGAGAAAGAGCGGGAGTGAGAACTAAGAATGAATCCGTCGTCGACGCCAGATCCGTCATCGCCAGCATCACCGTCGGTAGGGTTCAACACCGA CCAGCTTCCACACACCCACACCAGTCACGCCTCCGAAGACGATGAAGCATCCGTCGATCCCAATGTCATTCCAGACGATCCCGAACATGTCCCCGACGAA GACGAAGAAGACGATGGAGAGGATCTTTTCAATGATAATTTCTTAGATGATTATCGGAAGATGGAGGAGCATGATCAGTTTGAATCACTCGGACTCGATG ATTCGATGGAGGACGATAGGGAATTTGACCAGGTCATGCAAGATCGTAGGGCTGCTGAGGTTGAACTTGATGCTCGTGATGGTCGTGTTTCTACTCGCAA CAAACTTCCTCAACTTCTCCATGACCAAGATGATGATGATGATGACAGTTACAGGCCTTCAAAAAGGGCTCGAGCTGATCGACCTCCTCATATGCCAAGT GATGATGATGTTGATGGGATGCAGAGTTCACCTGGAAGGTCACAACGGGGACACTCAAGAGAGGATGTTCCCATGACTGATCAAACTGATGATGATCGAT ATGAGGATGATTATGACCATGAAGGTGAATATGCCATGTATCGTGTTCAAGGAACACTTAGGGAATGGGTTACCAGAGATGAAGTTCGCCGTTTCATAGC TAGGAAATTCAAGGATTTCTTACTGACATATGTTAATCAGAAAAATGAACATGGTGAATTTGAATATGTGCGGCTGATAAATGAGATGGTGTCAGTTAAT AAGTGCAGTTTGGAGATAGATTACAAACAATTTATCTATGTCCACCCCAACATTGCTATTTGGCTTGCTGATGCACCTCAGTCCGTTTTAGAAGTAATGG AAGATGTTGCTAAAAATGTTGTATTCCAATTACATCCAAACTACAAAAATATACATCAAATAATTTATGTTCGCATCACCAACTTACCAGTTTATGATCA GATTCGAAATATAAGGCAGATCCACTTGAATACCATGATCCGAATTGGGGGAGTTGTAACCAGGCGCTCTGGAGTTTTCCCCCAGTTGCAGCAGGTGAAG TATGACTGTAATAAATGTGGGGCAGTTTTGGGGCCTTTTTTCCAGAATTCATATTCAGAGGTGAAAGTTGGATCATGTCCTGAGTGTCAATCAAAAGGAC CATTTACTGTCAACATTGAGCAGACAATTTACAGGAATTTTCAAAAGCTTACACTCCAAGAGAGCCCAGGAATTGTTCCTGCAGGTCGATTACCAAGATA TAAGGAAGTGATACTGTTGAATGATTTGATTGACTGTGCTCGCCCTGGGGAAGAGATTGAGGTAACAGGGATTTATACTAACAACTTTGATTTATCCCTA AACACGAAGAATGGGTTTCCAGTGTTTGCCACTGTTGTTGAGGCGAATTATGTTACAAAGAAACAAGACCTATTTTCTACCTACAAACTTACACAAGAAG ACAAAGAAGAAATTTATAATTTGGCAAGAGACCCCAGAATAGGAGAAAGGATTATCAAGTCTATTGCTCCATCAATCTATGGTCATGATGACATAAAAAC TGCAATAGCTTTGGCTATGTTTGGAGGTCAAGAAAAAAATGTTGAAGGAAAGCATCGGCTGCGAGGAGACATCAATGTTCTTCTCCTCGGTGATCCAGGA ACTGCAAAATCACAATTTCTCAAGTATGTTGAAAAAACTGGGCAGAGAGCTGTATACACCACTGGCAAGGGGGCTTCTGCTGTGGGTCTCACTGCAGCAG TTCACAAGGATCCAGTCACAAGGGAGTGGACACTTGAAGGGGGAGCCCTTGTTCTAGCTGACAAAGGAATTTGTCTTATTGATGAGTTCGACAAGATGAA TGACCAGGATAGGGTAAGTATCCATGAAGCCATGGAGCAGCAGAGTATAAGCATATCCAAAGCAGGAATTGTGACCTCTCTCCAGGCACGCTGTTCTGTT ATTGCTGCTGCAAATCCTGTTGGAGGAAGATATGATTCCTCAAAAACATTTTCTCAAAATGTTGAATTGACTGATCCTATTATTTCTCGTTTTGACATAC TCTGTGTTGTGAAGGATGTGGTTGATCCGGTCACTGATGAAATGCTCGCACAGTTTGTAGTTGACAGTCACTTCAAATCACAGCCCAAGGGTGGTAACAA AGATGACAAGTCCTTTAGTGAGCCCCAAGATGCCTCCATGCCAGATGATCCTGAGATACTTCCTCAAGAGCTGCTGAAGAAGTACCTTACATATGCCAAG CTGTATGTGTTTCCAAGGTTGCATGATGCTGACTTGGATAAACTGACTCATGTATATGCTGAACTGCGGAGGGAATCCTCACATGGACAAGGAGTCCCCA TTGCTGTAAGGCACATCGAATCAATGATAAGGATGTCTGAAGCTCATGCAAGAATGCATCTTAGACAACATGTCATACAAGATGACGTGGACATGGCAAT TCGTGTTCTGCTTGATTCATTCATTTCAACCCAAAAATTTGGGGTGCAGAAAGCTCTGCAAAAGAGTTTCAGGAAGTATATGACTTTCAAGAAGGACTAC AATGACTTGCTGCTTTACCTTCTCCGCGGGCTTGTAAATAATGTTTTGCATTTCGAAGAAATTGTTAGAGGATCTGCTTCAGGTCTTACACAAGTAGATG TCAAAGTCGAAGATCTCTCCCGCAAGGCTCAAGAGCATGAAGTTTATGATCTTAAACCCTTCTTCAGCAGCGGTCAGTTTTTAAACGCCAATTTTGTGTT GGATGAAGAAAGAGGAGTGATCATACATCACCTCTTCTAGATGAAATGAAGGAAGAATGCAGCTCTGTTATTCATCAATGGTCCTGAACATAAATTTGAA TGTTGAACTGTGCGTTTCTCTACCATTTATGTAGACATTTGTCTTTTTAGTGGTTTGGGCAGGCCTTTAAAAAACATGGTGTTCGCTGGCCTGTTTGTTG TCTCTTTTCATGAATCAGCTGTTATTTATGCTATCTCTTTGGACTATTAATTTTATGTAGGCCTTTAAATTAATATTTAGAATATTAATTATGTTCTTTT CACTCAATCTTCAAAATCACATTTTAATAACATGTATAATTTGATTATAA
• Tissue: pods
• Gene name: LI_gene_139739;
• Additional information: details;

Expression of Ll_transcript_469300

FPKM

• PAB: 1.6
• PNAB: 43.5
• PS1: 24.7
• PS2: 9.4
• PS3: 16.6
• PW1: 11.2
• PW2: 4.3
• PW3: 1.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_469300

• Blastp: DNA replication licensing factor MCM2 from Oryza sativa with 78.79% of identity
• Blastx: DNA replication licensing factor MCM2 from Oryza sativa with 78.52% of identity
• Eggnog: dna replication licensing factor(COG1241)
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019456418.1)
• Pfam: Mini-chromosome maintenance protein 2 (PF12619.7)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;