Id Trinity | TRINITY_DN45510_c0_g2_i3 |
---|---|
Name Transcript | Ll_transcript_425883 |
Sequence | CCAATCGTTCGCTGACACTTGGCTAGCCTATTCATTCCTCAACCGCACGGGATTAAAACCCAGTCAGACACAAAGAAGCATCTTAGGAGTGGTGGGGTGG TGCTGCTTTTCTAACTGCTGCTGCAGAATTTCTGATCTCAAGGCACTGAATTTTATTTTAGTTTATTCTCTTTGTGGTGTCTGTGATCTTTTCACCTTTC TTTAAACTAATAGAGTTAAACTAAAGTAAAACAAGAAGTGCTACAACACTCTAAGTTTGAGTTCAAAGCAAGAAAGCGCATAACACATTCACACACACAA ATATAGAGAAGGTTGAGAGGGAGAGATTGCAAAAACCCACAAACTCTCAAAACCAAAGGAGAAAGGTTTGGAATTTGAGGCAAATGTTTCATTGTTTCAA TGCTCATCTCGAGGCAAACCTTCTACACCTTTTCTTCTTCATTTCTTTGTATCATTTTCCTACACACAACTCTTCTCTATGGCCTTGCCTTTTCTTCAAA CCATGAAGCCTCTATTCTCTTCACGTGGCTTCATAGTTCTTCATCACCATCCCCTCCTTCTTTCTCCAACTGGAACATCCATGACCCAAATCCATGCAAA TGGTCCTGCATAACATGCTCCTCACTAGGCTTTGTGACTGAGATCAACATAGAATCAGTCCCTCTTCAGCTTCCAATACCTACTAATCTCTCTTCATTCC CATTTCTTAACAAGCTTGTTATTTCTGATGCAAACCTCACAGGAACAATCCCTTTTGACATTGGTGATTGTTCTTCACTCACTGCTTTAGACCTTAGCTC CAACAACCTTGTTGGGTCTATACCTTCAAGTATTGGCAACCTCAACAACCTTGTGAACTTGTCTTTGAACTCAAACCAACTCACAGGAAAAATACCAGTT GAGATAAGAAACTGCATTGGGCTTAAAAATCTTCTCCTTTTTGATAATCAGCTAGGTGGAAGTATTCCACCTGAGTTAGGAAAGTTGCTGCAACTTGAAG TCCTTAGAGCTGGTGGAAACAAAGATATAGCTGGGAAGATTCCTGAAGAGCTTGGAGAATGTAGAAATTTGACTGTGTTGGGTCTGGCTGATACTAGAAT TTCTGGTTCTTTGCCTGCATCATTGGGTAAACTTAAGAAGCTTCAGACTTTGTCTATCTACACTACTATGCTATCTGGTGAAATTCCACCAGATTTAGGT AACTGTTCTGAACTTGTTGACTTGTTTCTCTATGAGAATAGTTTATCAGGCTCTCTTCCATCTGAGCTTGGTAAGCTACAAAAGCTGGAACAACTGTTTT TATGGAAGAATAGTATTATTGGGGCTATACCTGAAGAGATTGGTAACTGTACAAGCTTGAGAAAATTTGATCTCTCTTTGAATTCTCTATCTGGAACTAT ACCTTTGTCTTTGGGGGGTCTTTTAAAACTTGAGGAGTTTATGATTAGTGATAATAATGTGTCTGGTTCAATACCTTCAAGTTTTTCAAATGCTAAGAAT CTTCAACAGTTGCAAGTTGACACAAATCAGATCTCAGGCTTGATTCCAGTAGAGCTTGGGAAGTTGTCAAATCTCTTAGTGTTCTTTGCTTGGCAGAACC AGCTTGAAGGAAGCATTCCTTCCACATTGGGAAACTGTAGTAAGCTACAAGCACTAGACTTATCTCACAATGCACTCACTGGTAGCATTCCTGCTAGTCT TTTTCTGCTCCAAAACCTCACAAAAATGCTTCTGATTTCCAATGACATATCAGGTTCTATACCATCAGAAATAGGCAGTTGTGCCTCTCTTATAAGGTTG AGGCTTGGAAACAATAGGATTACTGGCAGCATTCCTAAGACAATATGCAACCTAAAGAGCTTGAACTTCTTAGATCTCTCAGGTAACCGCCTCTCTGGGC CGGTGCCTGATGATATTGGAAGCTGCACAGAACTTCAAATGATAGACTTAAGCAGTAACAACTTAGAAGGACCACTACCTAATTCTTTGTCATCACTATC CTCACTTCAGGTACTGGATGCATCTTCTAACAAGTTCTCTGGTTCCATAGCATCAAGTTTCGGACATCTTGTTTTTCTGAGTAAGTTAATCCTAGGCAAT AACTTGTTTTCTGGATCAATACCAGCAGCACTAGGCCTATGTTCAAATCTCCAACTTCTTGATCTTAGTAGCAATCAGTTCACTGGAAACATACCAGCTG AGCTAGGCCTTATTGAGAGTCTAGAAATTGCTCTTAATCTTAGTAGCAATTCGCTCAGTGGCCCAATCCCACCTCAGATATCTGCTCTTAACAAGCTTTC AATACTTGACCTGTCACATAACCAATTGGAGGGAGATTTGCAATCTCTTGGACTGCTATACAATCTTGTTTCCCTTAATGTTTCATACAATAAGTTCACT GGATTTCTTCCAGATAACAAGCTTTTCAGGCAGTTATCATCAAAAGACCTCACCGGAAATCAAGGCCTTTGCAATTCAGGTCAGGACTCGTGCTTTGTTA ATGGTTCTGGCAAGACAAGTTTGTCATTGAATGGAAATGATGCAAGGAAGTCGCGAAGGCTTAAACTAGCAATTGGATTGCTGATAACCTTAACAGTAAT AATGATAATTATGGGGATAACAGCTGTGATAAAAGCAAGAACAGACATTAGAGATGAGGATTCAGAATTAGGAGGAGAATCATGGGCATGGCAATTCATA CCTTTCCAGAAGCTAAATTTTTCGGTGGAACAAATACTGAGATGCTTGGTTGATAGAAATGTGATTGGGAAGGGATGCTCCGGGGTTGTTTATCGCGCTG AAATGGATAATGGTGAAGTCATTGCTGTGAAGAAATTATGGCCAATAACAAATGATGCAGGGGAGGCATTTAGGGATGAAAAAAGTGGAGTTCGCGACTC ATTCTCAACCGAGGTGAAGACGCTCGGTTCAATCCGTCATAAGAACATTGTCAGATTCTTAGGCTGTTGTTGGAACAAGAAAAACAGGTTGCTCATATTT GATTATATGGCTAATGGAAGTTTAAGCAGTATACTCCACGAGAGGACTGGAAATTCTCTAGAATGGGAACTTAGGTACCGAATCTTGTTAGGTTCCGCAG AAGGCCTCGCATATCTACATCATGATTGTGTCCCGCCTATAGTCCACAGAGATATTAAAGCCAATAACATCCTCATTGGCCTTGAATTTGAGCCTTATAT TGCTGACTTTGGCTTGGCTAAGCTTGTTGACAATGGCGATTTCGGTCGGTCTTCTAATACAGTAGCAGGTTCCTATGGATATATTGCCCCAGAATATGGA TACATGATGAAGATCACAGAGAAGAGTGATGTTTATAGCTATGGTATAGTTATGTTAGAAGTCTTGACAGGTAAGCAACCAATTGATCCAACAATACAAG ATGGTCTACATGTTGTTGATTGGGTGAGAAAGAAAAGAGGACTTGAAGTACTTGATCCTAGCTTACTCTCTAGACCAGAATCAGAAATAGAAGAAATGAT GCAAGCTTTGGGAATAGCCTTATTATGTGTAAATTCATCACCAGATGAAAGACCAACAATGAGAGATATTGTTGCAATGCTCAAGGAAATAAGGCATGAG AGGGAGGAATATGCAAAATTTGATGTTCTTTTAAAAGGGTCTCCTGCAAATGAAAATAAAAGCACTTCTGGAGTTTTGGCAACAACTTCATCAGTGCCAG TCATGCAAAACTTGAATGCAAAAAGTAACAACACAAGCTTTTCTGTGACTTCACTACTTCATTCATCATCATCTTCTAGAGAATAAGGATGTTTTTTTAA TCACTTTGCTTTTCAGTGATCCTTCTGTTATTGTTTTTTATATGTTTGTAAATTTTGCTGTGGCTGAATTAAAATCAACAAATATATTTGGAAACTACAA ATGTGGCTTTCACATTATCATTGGTGTGTACTCAAAATAGCTTGTAGTTGTTAATGTCTATGTTCAAGTTTATAGCATGTCATTACAGCAATAAAATCAA G BLAST |
Tissue | pods |
Gene name | LI_gene_139808; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_425883
Blastp | Receptor-like protein kinase 2 from Arabidopsis with 70.11% of identity |
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Blastx | Receptor-like protein kinase 2 from Arabidopsis with 70.11% of identity |
Eggnog | leucine Rich Repeat(COG4886) |
Kegg | Link to kegg annotations (AT3G24240) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019462372.1) |
Pfam | Leucine rich repeat N-terminal domain (PF08263.11) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |