| Id Trinity | TRINITY_DN45513_c0_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_426557 |
| Sequence | AAGCAATTTAATACTTACGCGTGGTGGTTAACTAACCCAAATTAATGATCCATCCAAAACAACACAGTTTTAGATACCATTATTATTATTATTACATGTC TTAGGATCCCCTTTTCCCATTTCTCTGCTTCTTGAACTCATCTATAAGCTTTCTCCCCACACACACAAAACATGATATGAGGTTCTAAGAAACAACCACT TTGTCTTTTTTACAAGGTTAGGTCCCTCTCCCTCATTTCTCTCTCTTTTTCCACGAAATGTCATTGAAAGTGTGTGTATATAATAAGGCTGCTAACTATT ACTTTCTACTTGCTTTTTAGTCATAATATTATGCCTTTTTATATCCACAAGTGTCTGACTCAGATTATTTCCATTTGATATTTGATAACATAACTCAGAA AGAAAAGAGAAGACATCAAAACCAAACATCAAAGAAAATACTTGAAAACAAAGCAAAGCAAAGAAAAGGGTAGTGGTATTGTATTGTTGGGGGTGGTTAT GGAGAGTTATCTAAATGAGAATTTTGGAGGAGTTAAGGCTAAGAACTCATCTGAAGAGGCTCTTCAAAGATGGAGGAAACTATGTGGGCTTGTCAAGAAC CCCAAAAGACGCTTTCGTTTCACTGCCAATCTTTCCAAAAGGGAAGAAGCTGCTGCTATGCGTCGAACCAATCAGGAGAAGCTAAGGGTAGCAGTTTTGG TTTCTCAAGCTGCATTTCAATTTTTGCAAGGCGTGCAACCAAGCAATTACGTTGTGCCTGATGAAGTGGAAGCTGCTGGTTTTCAAATATGTGGTGATGA ATTGGGGTCTATTGTTGAAGGCCATGATGTGAAAAAACTGAAAGTTCATGGTGGGGCTAATGGTATCGCAGAAAAACTTTCTACATCCACCACTGAGGGG CTTAGCAGTGAACCTGATTTACTGAACAAGAGACAACAGATATATGGAATCAACAAATTTGCTGAAAGTGCATCTAAGAGTTTCTGGGTTTTTGTTTGGG AAGCCCTTCAAGACATGACTCTCATGATACTTGCAGTGTGTGCTTTTGTGTCTCTGATAGTTGGCATTGCAACAGAAGGATGGCCCAAGGGGGCCCATGA TGGTCTTGGAATTGTTGCAAGTATCTTACTGGTTGTCTTTGTAACAGCAACAAGTGATTATCGCCAATCATTGCAATTCAAGGATTTAGACAAGGAGAAG AAGAAGATTTCCATTCAGGTCACAAGAGATAGTTACCGGCAGAAAATGTCAATATATGAATTACTCCCTGGTGATATTGTGCATCTTGGCATTGGTGACC AAGTCCCTGCTGATGGACTATTTGTTTCAGGATTTTCAGTGTTGATTGACGAGTCAAGTTTAACAGGAGAGAGCGAGCCAGTGATGGTGAGTTCTGAAAA TCCGTTTCTCCTTTCTGGAACCAAGGTCCAAGATGGATCATGCAAGATGTTGATTACCACTGTTGGGATGAGGACTCAATGGGGTAAGCTGATGGCTACT CTCAGTGAAGGTGGAGAAGATGAAACTCCATTGCAAGTGAAATTGAATGGAGTGGCAACCATTATTGGGAAGATAGGCCTATTCTTTGCAGTGATTACTT TTGCAGTTCTAGTGCAAGGACTAGTGAGCCATAAACTCCAACAAGGAAAGTTATGGAGCTGGGATGGGGATGATGCATTGGAGATGTTGGAATTCTTTGC TATTGCAGTTACCATAGTTGTTGTTGCTGTTCCAGAAGGGCTTCCATTAGCTGTGACATTGAGCCTTGCATTTGCTATGAAGAAAATGATGAATGATAAA GCCCTTGTCAGACATTTGGCAGCGTGTGAGACTATGGGATCAGCCACAACTATATGCAGTGACAAGACTGGGACACTAACAACCAACCACATGACTGTTG TGAAAACATGCATTTGTATGAATGACAAAGAGGTGAGCAACAAGGCTTCTAGCTTGAGCTCTGAACTCCCACCTTCTGTTGTGAAACTGCTGCAACAGTC AATATTCAATAATACAGGAGGAGAAGTGGTGATTAATAAAGAAGGAAAACTTGAGATTTTAGGGACTCCGACGGAGACTGCAATATTGGAGTTTGGACTG TCACTAGGTTCCAACTTTCAAGCAGAGCGACAAGCATGTAAACTTGTTAAAGTTGAGCCATTCAACTCTACCAAGAAAAGAATGAGTGTAGTCGTGGAGC TCCCAGGGGGAGGATTACGAGCACACTGTAAAGGTGCTTCTGAAATAATTCTGGCTGCTTGTGACAAGGTTCTTAACTCGAATGGTGAGGTTGTCCCTCT TGATGACGAACTGTGTAACAGTCTTAAGACTACAATAAACCAGTTTGCTAATGAGGCACTAAGAACTCTGTGCCTTGCTTATATGGAATTGGAAAATGGG TTCTCTGCTGAAGATCCTATTCCTGTTTCGGGTTATACTTGTATAGGAATTGTTGGTATCAAAGATCCCGTTCGTCCTGGTGTTAAGGAATCTGTAGCTC AATGCCGTTCTGCTGGAATAACAGTAAGGATGGTTACAGGAGACAATATTAATACTGCAAAGGCTATAGCCAGAGAATGTGGGATTTTGACAGATGATGG CATAGCAATTGAAGGTCCAGAATTTAGAGAGAAGAGTCTAGAGGAATTGTTGGTACTGATTCCCAAAATTCAGGTGCTTTTTACTTTCTATATGCAACAA CATCTTGATTGCTTTAATACTCTACTCAATCATGCTAATGAATTATTGTTGATCCTTTCAGTAACACAATGTTTAATGAATTCTTGTAGGTTATGGCTCG ATCTTCACCTTTAGACAAACATACATTAGTGAAGCACCTGCGTACTACATTTGGGGAAGTTGTAGCTGTAACTGGCGATGGAACAAATGACGCCCCAGCC CTTCATGAAGCTGATATTGGGCTTGCAATGGGCATTGCTGGAACTGAGGTTGCAAAAGAAAGCGCAGATGTCATAATTCTTGATGACAACTTCTCCACAA TAGTGACTGTGGCCAAATGGGGACGATCTGTTTACATAAATATTCAGAAATTCGTACAGTTCCAGCTGACGGTTAATGTGGTAGCATTAATAGTGAACTT CGTATCAGCCTGTGTGACTGGTTAGTAAGATAATTACCCGAATGTGATTGTGGAATTCATATCAACCTGTATGATATGTTATAAAAGCTTTTGTACTAGA TTTTTCCTGTGAAATTAAATGCAGTGCATTCTTTTCTACAGGAACTGCACCACTAACAGCTGTTCAACTTTTGTGGGTGAACATGATAATGGACAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_139822; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_426557
| Blastp | Calcium-transporting ATPase 2, plasma membrane-type from Arabidopsis with 81.18% of identity |
|---|---|
| Blastx | Calcium-transporting ATPase 2, plasma membrane-type from Arabidopsis with 81.18% of identity |
| Eggnog | ATPase, Ca transporting, plasma membrane(ENOG410XNNC) |
| Kegg | Link to kegg annotations (AT4G37640) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019444917.1) |
| Pfam | Ca2+-ATPase N terminal autoinhibitory domain (PF12515.7) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |