| Id Trinity | TRINITY_DN45514_c0_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_425734 |
| Sequence | CTCACTCACTCTCCTTTCTCTCTCTTAAGCGCATGCAATTGGGGTTGGTTTCTGTGTATTTTCTCGCCGGAAATGACGAACAGAGGCAAGGGCAAAGGCA AGGAGGTCGCCGGAAAAGGATCCTCCGGTAAGCGTAAGATTACCGCTGACAACGACAAGACCGGCGGTGGCAAAAGGAGGAACCGCGGCGTCGTTCAGTT TTTCGAAGAATCTGCTGACGTCGATGACTTTGAAGATAGCAGCGACGACAGTGATTTCAGCGATGATTATTTTGGAGATGAAGAGTTTGAGACATTGTCA ACAATGAACAATGAACCAGCTAAGGGACAAAGTAGCAGCTTCCCATTTATCCCCAAAGAGGAAGAGATAGATGAAGAAGAATTTGACAGAATGATGGAAG CACGCTATGGAGAAGCTTCTACGTTTATTAGGTTTGCTGGAGATGATATAGATGACAAAGGAATTGATCCGAATTCCTTCGGCGGCAAGGAGTTTGTTCC AACCATCTGGAAAGTTAAATGCATGGTTGGACGCGAGAGGATTTCAGCTTTCTGTCTAATGCAGAAGTTTGCTGACTTAAAATTGCTTGGTACTAAGTTG GAGATAATATCTGCATTTGCTGTAGATCATATGAAAGGATTTGTGTACATTGAAGCTGAAAGGCAATGCGATATTAATCAGGCATGTAATGGGATTACTG GTATCTATGTTACTCGCGTGCAACCAGTTCCAAGAAATGAAGTTTTCCATCTATTTTCTGTTCGACCTAGAAGCAATGAAATTGCCGTGGGTACGTGGGC TCGTGTAAAAAGTGGTCATTACAAGGGGGACATAGCACAGGTTGTGGCTGTGAATAATACCATCAAAAAAGTTACAGTGAAGCTTATTCCAAGAATTGAT CTACAAGCATTGGCTGCCAAATTTGTAATGATGTTGCCAGTTTCCTGTAGTTTATACTTTATATTTGCTATTTGCTAATAACATATTTATTCTGTCATGT GATAGGGATAACTGCAATGGACAAATATTTATTATTGAACCAGAAGGGGTTCACTGTTGTACTTTCCCGTCCGTTGAAAACTATCCATAAACTTGTCGAA CCCTTTTGCCTTTAGCATTAATGCAAATGTTGCATCGTGCATTTAAGCAGCAGTGTGCTGTGCCAACATCACATGTATTCAGCAGTCTGAAAACTGTCAT ATTTTTAGTCGTTTTGTGTACATATTTTTTATTAAGACCTTACAATATGATATACTATAGAAAATAATTTACATTGTCTACTCTAAAATGTTCATGAGAT TACCAAAATTGAGATCAAACCAGTATGTGTAATTTTTATGACCAATATTAAGACCAGTATGTTTTTCCCCCTTCAATTAGGGTCCTTTTTATTTGTGCTG CTCTTGACTTTATTGTTCCTAGTGTGTGGCCGTGTATATGTGTGTGTATGTGTGGTAATTATTGATATATTTTTTACTCATTGTTACAGGGTGGTGGATA CAGTCGCCAGAAAACAGCTGCTGTGCCAGCACCAAGATTAATCAGCTCAAGTGAACTTGAGGAGTTTCGACCTCTCATACAAATCAGACGTGACCGTGAT ACTGGCAAGGTTTTTGAAGTTCTTGATGGTATGCTGCTTAAGGATGGATATGTATACAAGAAAGTATCTCCTGATTCATTAAATTTATGGGGTGTTGAGC CAACAGAAGAGGAACTGTTGAAGTTTGTGCCTTCTGAAAACAATGAATCAAAAGATTTGGATTGGCTCTCTCAGCTTTATGGAGACTCAAAGAAAAAACG GGTCATAAGAGATGATAAGGGAGGTGGGAAAGGAGAGAGCTCATCAGGTTCTGCCGCGGCAAATGGTTTTGAACTGTATGATCTTGTGTGTTTTGGCAAG AAGGATTTTGGTTTAATTGTAGGCATGGATAAAGATGATGGCTACAAGATTCTTAAAGAGGGTCCAGATGGACCTTTAAGTGTGAATGTTCAGCGACGCG ATATAAAGTGTGGTTTAGTTGATTTGAAACTTAGTGCCCAAGATCAGCACAATAAAACTATATTGGTGAATGATAGTGTCAGGGTTCTGGAGGGGCCATC CAAGGACAAAGAAGGAATTGTTAGGCATATCTATAGAGGGATTATCTTTGTATACAATGAAAGTGAGGAAGATAATGGTGGTTACTTCACCTCTAAATCT AAAATGTGTGAGAAAGTCAAGCTTACTGTTGGTGATTTCAGTGGAAAGGATAGTGAACCAGGCCCTTTAGTCTTCGAAGACATGCCAACATCACCAAGAT CCCCTCTGTCACCAAAGAAACCATGGCAAGCTAGAGAAAACAATCGTGAATTTAACCGTGGGGACCAAGATGGCTTGTTTACTATTGGTCAAACCTTGAG AATTAGGATAGGTCCTTTGAAGGGATACCTCTGTCGTGTCATTGCCTTACGCCGTACTGATGTTACTGTGAAACTAGACTCTCAGCAGAAGGTTCTTACA GTTAAATGTGAACATCTTTCTGAAGTTCAAGGGAAGGGTACTGCTGTGTCAACAAGGGGTGATCCAGATCCAAGCTCGTCAAAGCCATTTGATCTACTGG GTACTGATGGCAACTCTGGAGGTTGGATGGATGGAGCGGGAACATCCACTGGTGGTGGTGGATGGAATGCTGGAGGAACGTCCACTGGGGGTGGTGGATG GAATGCTGGAGGAACGTCCACTGGTGGTGGTGGATGGAATGCTGCAGGAACGTCAACTGAAGGGTATGTTTTGCAGTGATATTAGTTGATGTTGATACAC TCTGCTCTGTACTCAATTATCATATATTCTGTCTAATTATTCTTTTTGGGTTTGATCATCAAAAGGAATATTATTATACTAGCTACTTATGTAGAAAACT ATCATGTAATCTGGGAAGGGTTAGCTTATAGCTATGAAGCATATGTATGGACAATGAACACATTACACATGGACATACCAAGCAGTTTTAAATACGAAAT TATTCTTGATGGATTTAGAAATTTGTTATGGAATTTTAGAAGGATCATCAAAAGTACAAGGAACACATGGCACAGCATGACACATGAAAATACAATAGAT ATATATGTCAAACATTTTATAAAGTGTATCAAAGCATACCAAAACTGTAGCTATTAGGTAGAAAGAGTTTTTCAAAGTATTTAACTGTTAATGCTGAGAT TTCTCATGAGTACTATATAGATGTGTGGACAGTGCTGTGCTCTGAGTGTCATTGTTTTTGTCATACAAGGTGTCAGCGTAGTGTACCTCATTAGTTGACA TTTTTACTCAATATATTTCATTACATTTGTTAAATATAAGATGGGAAAGGATTTATGGCAATGCTGTTGATACTACTTTTTTGTGTATTTCTTTACAGTC AGATGATCATACATCTACGAATTTCTTCTCAACCGTGTGCTTTATCCTATTGACATCATTTTTATATTGTTTATTAAATATTTGCCCTGATACTTTATAA TATCAAAGACCTTATTTTTTTTCTCTATTTCTTATCATGATTCTTTTTTTCACCTTGAGTTGGTTACTTTGTTCTTGTTTATGGTAACATTTTGCAGGAG TACATGGTCTAACCATTCTGCGCCAAGCACCTTGGAGACTGTAAATCCCATCAGTTCCACGGGCGTAGAAGACCCTGCTTGGGAAACTAAAAAAACTTCA AACACGAGCTTGACATGGGGTGCTGTAGCGGGGAACAAAGCTGCTGATGATTTGGATGGAAACCAACCCTCTGGATGGGACAGTAAAAGCAATTGGAATA CACCCAAAGCTTCTGAAGATGAGTCATCTGGTTGGAATCAGAAGTCTGATGAACATAAAAAAGATGTTGAACAAAATGGCCAAGGCAATGGTTGGAAAAG TGGATCAAGTGGTGGTGGAAGTAATTGGAATGCTCCTGTATCTTCTTCCCAAGTGAACTCTGAATGGAGTAAGAAGTCCACTGAAGATGATAAAGAGGAA AAAGGTAAAGACCAAGGTGGTTGGAGTGCAGGAAAAGCTTCAGATGGAGTAAACACAGATTCTGCCTGGGAAACTAAAAAATCTAGTTCAAGTTGTTCTG GTTGGAAAAGTGGATCAAGTGATGGAGCTAAAGAAGGTTCCAATTGGGGCAACATGAAATCTGGTTCTGTAGCTGAAAACCAGAACTCTGATTGGGAAAA AGCAAGTAATTCAAATTCTGTATCTGGTGATGCTGGGATACTTGGAAAAGGGCCTGTTGAAGATTCATCGAAAGACAGTTGGAAGAGTGGTTCTGCTGAT GGAATTAAACAAACATCAAACTGGGGTGCTTTGAAATCAGGATCAAGTAGTGAAAATGAGAAACAGAAACCAAACTGGAGTTCTGAATTGAATCAAACTT CCAGCTGGGGTAAGAATAACAATTCCTCTAGTGGTGCTGCTGCCAATGAAAACAATATTTCCAACTGGAGTGCTGCGAATACTGGTGCTGGAAACCAAGA TTCCTCTTGGGGAAAGAAAAACCAGGATTCTGATCAGAACAATAGTAATTGGAATTCTGGATCTGCCAGTAATTCGAATCAAAATTCAAATTGGGGAAAG AAAGAAAACTTATCTGAGAGTGCTGGGAATGACAACAATTCCAACTGGAGTTCTGGGTGTACTGATACTGGTAACCAAGATTCTGGCTGGGGCAAAAAAA GCAATTGGAACTCTGGAAACAGTGGAAGCCAAGCTTCTGATCTGAAAAATAGCAAGTGGAATTCTGGATCTGATGGTTCTAATGAAAATTCCAACTTGGG AAAGAGTTCCACCTGGAGTTCTGGAAATCAAGATTCCAGTTGGGGGAAGAAAAGTACATGGAATTCTGGATCTGATGATACAAATCTAAATGACTCTTCA GAGGATGGAGCAGGTGGTGGGAACTGGAGAGGTGGCTTTAGAGGTAGAGGTTTTCGGGGTAGAGGAGACCGTGGAGGCTTTGGTGACCGAGGAGACCGTG GAGGCTTTGGTGGTCGAGGAGAACGTGGAGGCTTTGGTGGCCGAGGAGAACGTGGAGGCTTTGGTGGTAGAGGAGATCGTGGAGGCTTTGGTGGCAGAGG TAGATCTGACAGGGAAGGTTCAAGTGGTAGATGGGGATCAGAGGGGGGATTTGGAGGCCGAGGTCGTGGAAGGGGTGGCCAATCTGGTAGTTGGAATGAC CGAAGGGATTCTGATCATGATGGGTCCTCTGACTGGAAAAAGGGGGGAGAGAATGCTGAAGGATGGAAGGGTAGTAATGGATCTGGGTCTTGGAAACAGG AAAGTGGTGACAATAAGGGCGGGCAGAGTTGGAACCAGGGCAATGCTGATAAGCAGCCTTCAAGCTGGAGCCAAGGAGATGGAAGTAACAAGCAATCGCA GAGCTGGAGTTCAGCAACTGGTGGAGGTGGTGGCAAGTGGAGCAGCAAGGGGTCAGAGCAGTCTGGATCTGGTGCTTGGAACCAGGAAAGCGGTTCCAAG AAGGGTGGGCAGAGCTGGGAGCAGGGAAATGCTGATAAGGATCCTCCAAGCTGGAACCAAGGAGGTGGAAGTAATAAGCAATGGCAGAGTGGGAGTTCAG CAAGTGGTGGAGCTAGTGATTGGAACAGCAACATATCAAAACAGGCTGCTGAGGGGACCAGTGCTCAGGATGGTGGGTGGAACAAGGGATCTAATTCCAA TCAAGAGACTGGTTGGAAGACTGCTGGTTCAGGAGGTGATACTGGAGATCGAGCTCCTGGGTGGGGTCAATCAAGTGCTGCAGACAATGGTCAATCATCT AGTTGGAATACATCAGCATCAGATGGTAAGGAAGAAATTCCACCGAATTATCCTTTGTGATTTACCACAGTAAACCTGGAGTACCTTTCAAAAGAAAAAT AAATTACAATTCAAATTACTAGTTTTAATTATGTTTAATAGACTCATTATATGAATTAGAATTAATCTGTATAGTACAGTACAATTATCGCATTTGATTT ACAAATGCCAGAGTTCTTCTCTCCTTATGTAGGTGCAGCAAGCTCTTGGGGCAAGAAAAATGATGGGAGTGACAAGGGTGGATGGTAATGACTCTTGAAA ACGTGCAGATGGAGCAAAGAAGGAAACGGAGCTCAGACATTTCTAGTTAGTAATAAAGAAACTCTTGTAGATATATGGTGTTAAAATTGTCGGTACAAAA CGGTCTGCTGGAACTGGATGTTTATTTTTCAGCTTTAAATTATGGTAAGATCTTATGAATGGCTTGTCCCTTCGCGGTAACGTCCAAGGAATTTTAAGAA ATATACTTTCCTGGATATTTGGGTAGGTAGTTGTGTTACCATTTTCTCCTGTTTTGGATGTTTTGCGTTTGTTTGTTTGCTTGAATTGAAGGTGAAGGTG AAGGTGATGTGCTTAAAATGTTTGTTTTGTTCTTTCTATGTACTTTTGTTGATGGGTGCTTAGAATCTATTCTATTCGTTGATGTGATGAATTTTTCATG GATTCATGGAGAAAGAGTCAACCTCGGTAATTTCTATGCCCAACGATATAATTAGCATCTGTTTTGCTGAGTATGGGATAGGATTGATAAATAAAGCTGA GTGCTTCCTAATTAAGTGTTCTTGAATAAAATGGCC BLAST |
| Tissue | pods |
| Gene name | LI_gene_139825; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_425734
| Blastp | - |
|---|---|
| Blastx | Protein RNA-directed DNA methylation 3 from Arabidopsis with 53.33% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019441366.1) |
| Pfam | - |
| Rfam | - |
| GO | - |