Id Trinity | TRINITY_DN45528_c0_g1_i9 |
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Name Transcript | Ll_transcript_426666 |
Sequence | AAAACGGTCAACATTTCAGTGAGAAAAAGCGCGTGTAGTTGCTGATTATCATCGAGAGGATAGAAAAGAAGGTTCGATTTCTCCGCCAGGGAGCTTCGAT TCCGATTTGCATTTTCCGTTTCTCCTCTCACATGTCGCTTATCTCCAACTGTTCCCCCTCCTACGCCACCGTCGCCGGTGCCGGTGCCGGTGCCGCCGCT TCGAACAGGAGGCCGAAATTTCCATCTAATTCATGGATCAATACCAACGCCATCTCTCAGAATGACAAATTCAACGTCTCTCGGTTAGCTCTTAGCCACT CTAACCACAGAGTTAAAGACCGGACCATATCAATGGCATTAGTTGGTGGTGCTCTGGGACAAAAGGGGGATGTTTCCACCTCTTCTAGTACTTTGGCATA TGATTTGATTCAAGGGGCACTTGTGAGATGGAGTTCTGATATGGACAGGTCTTTACCTGCTCCACCAACAGCTGTTTTTCTGCATGGAATCCTAGGTTGC AGGAAAAACTGGGGAACTTTTGCCAGGAGATTGGCACAAGGGTTTCCTACATGGCAGTTTCTTTTAGTAGACATGCGATGTCATGGTGATTCAGCATCAA TCAAGAAGAGAGGTCCCCATACTGTTCAATCTGCTGCTCTTGATGTTTTGAAACTGGTTAGAGAACTAAGAATAACGCCTCGTGTGTTAGTTGGTCATAG TTTTGGAGGAAAAGTTGCTTTGAGCATGGTGGACCAAGCTGCAAAACCTCTTGCTCGGCCAGTGAAAGTATGGTCTCTAGATGCAACCCCTGGAAAAGTT CGAGCAGGAGGAGACGGTGAGGACCACCCAGCAGAACTCATATCCTTTCTGAGAACTCTGCCAAAGGAGGTCTCTTCAAAGAGGGATGTTGTCAAAGCTC TTATTCATCAAGGGTTTTCCAACGATGTGGCACAGTGGGTCGTGACAAACCTACGGTCTACCAGCTCCACTGATTCTAAATTGTCTAGCTTCACATGGGT GTTTGACCTGATGGGGATTGCAGAAATGTATAGATCTTATGAAGGAACAAATTTGTGGTACCTACTGTAACAATGCTGTCTGTGATATATTTATTTTATC AACCTCAATTCCTTGATTGAGAGATGGGGCTCACATCCTGCCTTCAGTATGAATGTTAGTGATATTGTGAGGAAAATTGTTGAAGATGTACCTAGTGGTG TGCATGTGAACTTTTTGAAAGCAGAAAGAAGCTTACACAGGTGGGCTCTTGAAGATCTTCAGCGAATCCATGCGGCTGAGGAGCTTGCCGCTGAAGAAGG AGCTGGAGTTAAGATGCATGTCCTTGAAGATGCTGGCCACTGGATACATGCTGATAATCCAGATGGACTCTTCAGGATACTGTCATCCTCTTTCCAAGGA AGCAAGTCCTGAGTTTAATGCGTGAGCTTCTCATCTATCTAATTTCTATCTTATTTGGGTGGGGCTATCTTCAGAGTTTGATGTTATCAAATGTTCTTTC TTCCTTTTCCCATTTTTTCTATTTGACCCATGTGTATATGCTTTTGTTTTTTTCGCTTTGTAATCTTAAATCTCCGTATTTGTTTTTACTTTTTACCATT ACTCCATTCATTAAAAAAATAAAAACATGTCCTGGTATGCAGGAATCCTAAATGTTGAGGTTCTTAAAATCCTGAATCTAAGGTATTTAGGTAATAGATA TTTAAGGAAAATTAAGAGTATCATGTTTCAATTGTTTTTGGCGTATGATGTTTAAGTTGAACGCTCTTTGGTGTAATACTTGCAATCTTGTATTCTGCTT ACCAAATGCTTATAATTGTGTTTGATTTCTTATTTGTTATTGATACATGTGTCTACAGCATTCAAAAATAAATCCGTCTTGGATTCTATTTCCTTTTCTA CTTTGCAGGAAATCCATTCATGCTTCATCAC BLAST |
Tissue | pods |
Gene name | LI_gene_139860; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_426666
Blastp | Protein ABHD11 from Xenopus with 26.83% of identity |
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Blastx | Protein ABHD11 from Xenopus with 28.36% of identity |
Eggnog | - |
Kegg | Link to kegg annotations (735011) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019444614.1) |
Pfam | Alpha/beta hydrolase family (PF12697.6) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |