Ll_transcript_425827

• Id Trinity: TRINITY_DN45542_c0_g1_i7
• Name Transcript: Ll_transcript_425827
• Sequence: GTTCCAACACAAACTAGTTAAAGTCAGTTCAAGTCATGTTTATGCCTTGTCCGATCTGAGTTATACATTTGTTCTAATTAGCCACCACCCACTGTGCTCT CCGCTGCTCCTTTCAAGTATGTACTGCCTACAAAACCTTCTCTTCCTCTCATCACTTACCCCAACATTATTTCTTCCCACCTCTTACTTTCTGCATTCTC TTTTTTTTTTTTTTCATTTTCTGATTAAGTGTTCAACACGTAATTCATCTATCTTCACCATTTTAACTCTTAACCTAACCCATCTAAGTTAAAAATATAT GTTTTTAATTTTGCTTCTAACCTGTTTGATAAAATGCCTCACTGAAACGTTCTCCTTTTATTTGATTGTGCTGACTTGGATGTTGATTTGGGAACATTTT AATATTAGTTTGAGCAATAAGTATTTAATTTGGAAACTTTTTCCCTTAAATTTGGTAGATATTTTAATTTCCTTTTTGTTTTTGTTTGTTTTGGTTTAAG TATTTCAGTTTAAGGGATTCGTGAGGTTATGATATATGGCACTTGCATCAGACCCTCTTCACTGAGTTTCAGAGCATTACTGTTGCATAAGTCGTCGTAT TTTAAAGTGAAATTATCGTCCAAGTGTTTTTCTAGGTGGATAAAAATGGAAGGTAATCTTAATTATACCATAGAGGACAACAAAAAGGAGTCTAGAGGTG CCTTGATTGTCCTAGAAGGCTTGGATCGTTCTGGGAAGTCTTCTCAGTGTAGCAGACTAGTGTCCTACCTGGAAGGGCATGGAATCTCTGCTGAACTATG GAGATTTCCCGACAGAACCACGGATGTTGGGAAAATGATATCTGCCTATCTTACTAATGCATCACAATTGGATGATCACACTATTCATCTTCTCTTCAGC GCCAATCGTTGGGAAAAGAGGTCGTTGATGGAAACTAAACTGACATCTGGAACAACCCTCATTGTTGACCGTTATTCTTATTCTGGTGTTGCTTTCTCAG CTGCCAAGGGACTTGATATCGAATGGTGTAAGGCACCAGAGATTGGGTTGCTTGCGGCAGATCTGGTAGCATACCTTGACATATCACCAGAGAAAGCTTC AGAAAGAGGAGGTTATGGAGGTGAGAGATATGAAAAGCTAGACTTTCAGAAGAAGGTTGCTGAAAGTTTCAAAGATCTTCATGATACAGCCTGGAAGGTT GTAGATGCTTGCCAACCCATAGAAGATGTGGAGAAGCAATTGCAAGACATAGTACTTCACTGTGTCACAGAATGTCAGAAGGGAAAACCCCTTTCCTTCT TGTGGTCTAAATAGACTTGTACTCTTGACAGTTTCTGTAACCATGATGAGATCTTCTATATGTCTAAATTTCATAGAACTTGGCCTGCAAAAAAGCCATA CTGGTGCAAGGATTTAGATTATGTTACCATTGTTATCTACCACAAAATATTACCATTTTTTACAATTACTATTTAATTTATTTATCTACATTGAATATTA TGGATGTTTAGATTAGTGTTTTTTTTTGTGTGTGATGACATTTGGGTTAGTACTTAGTTTCTATTGAGCACCAGTTACAACTTGATAACGATATTTACGT TATTACCCTTACCACAATAGTGGCAGAGATTATGATTCTAATTTTTTTGGTTGCATGGAGATTATGTTTATAAAGAATAAAAAATATTCAAACATATTGG TTGAGTAGGAAAATGTTGTGGG
• Tissue: pods
• Gene name: LI_gene_139935;
• Additional information: details;

Expression of Ll_transcript_425827

FPKM

• PAB: 1.1
• PNAB: 0.2
• PS1: 0.1
• PS2: 0.6
• PS3: 0.2
• PW1: 0
• PW2: 0.2
• PW3: 0.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_425827

• Blastp: Thymidylate kinase from Arabidopsis with 63.89% of identity
• Blastx: Thymidylate kinase from Arabidopsis with 63.89% of identity
• Eggnog: Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis (By similarity)(COG0125)
• Kegg: Link to kegg annotations (AT5G59440)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019459500.1)
• Pfam: Thymidylate kinase (PF02223.16)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;