| Id Trinity | TRINITY_DN45545_c0_g1_i7 |
|---|---|
| Name Transcript | Ll_transcript_426443 |
| Sequence | GTTCGTTTTGAAGGACACGTGGTAAACAAAATTGTGGCTGAAATCCACATGAAATTAAACGACAAACCACGAAGAAACAACCAAGAAAAAGGACACAAAA TGCACACTTAGGTTTGGAAGTTTGATTAGATAATTGTTGTGAGACTCTTTTGAGCCACCTGCCCCTTTCTTATTCTTCATCCCCATCAAAGGTATAACCC ACTATCTTTACTTTCCAAATTTCAATTCTTTTACAATTAGGTCTCAATTGCCCCAACTTAATTCAAACTTTTATTTCACCCCCGCTTTCATTTTTTAATC TTTGCGCCTCTATTTGGTTTTGATTCTCAAGCTGCTGTTGTGTATATATATATATAATGTTTACAGAGGGGCTATCTAGTTTGTTTTTTTCTTCAGTTTT TCCTTTTTAATCTTAGTATTTTACGAATTAAACTGTTTCTTTCTGTGGTTAAGAATTCAGGGCTAACTAAGATTTTTGTGTATAGGTTGTTTTGAACTTT TGATGCTAAGTTAGATGGCACTGCAAGGGAAACAATAAAAATGGAATTTTGAGTATTGAATAGGTTGATTCATGATGATTTTGTTTCAGTTTAGCTATTA ACACAACAGTAGTTGATTTGTGCCGAAAACTTCTACACACAATCTTCCACCAGATGTTTAGACATAATCAGATATGCAGGTTTATATTATATGTGTTGTG ATCAGATTTCGGTCATTCGGGAGTCTGGAGATATACAATTTTTCCACCCTTCTAGAATTAAGGCCCATAAAGAAAAACTAAAAATGTACATATTTGATAT CCTAACCTTTGACGCTTTCATAATTATTATCAGTTTAACCGCAGGAAGCTAAGATTATCAAAGTCGATTTTCACCACTTCATCTGTATAGACGATATTGA ATTGTGTTCAAGTCTGCAATAGTATAAAATATTGTTTCTACACGTCCTTCGGCTGCTTGTGAGACCCCTTGGCTATCCATTTGGATACTATGATGGCTCT TCCCGGCTCTTTGCAGATGTCCCATGGACTGGGACTTTGCTATAATATGGGCTGCAATAAACACCCGGGGGCAACAGGAAGAGGAAAGATATATTTATTG AGTGCAGGTCCTTCATATCCTGTTTCGTTCATGAAACAGGGTTGCTGGGGTTTCCAACACTTCCATCAAATAGGCAGGCCGACACGTACATTATCTTATA AATCTCGCTCTTTTAGGTGCCATTCTTTTTTAGTGCCAGGCCAACCAAGTGAGCTACCTGTTGTCAAGGTGGCTGCTACCATGTTGGTGAGGTCCTATAA TACGCTACAAAGCAGTCCTGTCGTAGTAAAGTTGATTCCTGCAGTTGGTATTATCATTTTTGCACTGTGGGGTTTAGGCCCATTTATGTGTCAGACAAGG AAACTTTTTTTTCAGAGGAGTGATAATGGTTGGAAGAAGAGTACCACACATTATATAGTAACTTCTTACATTCGGCCATTACTGTTATGGACTGGAGCAA TACTTATTTGCAGAGCATTGGAGCCAGTAGTTCTACCTACAGAAACTGGCCAGGTTGTTAAGGAAAGGCTTTTGCACTTTGTAAGATCATTGTCAACTGT ACTGGCCTTCGCCTATTGTTTATCAAGTGTGATTCAACAAGCACAGAAATTCTTAATGGATAACACTGATGCAAGTGAGACAAGAAATATGGGATTCCAA TTTGCAGGCAAAGCTGTTTACTCTGCAGTATGGATTGCTGCTTTTTCACTGTTCATGGAATTGCTGGGCTTCTCTACCCAGAAATGGGTGACTGCAGGAG GTCTTGGGACAGTTCTGTTGACTCTCGCTGGTCGTGAGATATTTACAAATTTCCTTTCGAGTGCGATGATTCATGCAACTCGACCTTTTGTGGTTAATGA ATGGATTCAAACAAAGATCGAAGGATATGAGGTTTCCGGTACTGTTGAGGTGTGTTAAATTGCACATTTTAACTATCTAATTTAGAATTATATATTAAAT GTGTACAGTGTAGTTTTTATATACATAATAACTTAACAGAAAGAAATTACAGAATTTGGTGTAGTGCTTTTGATATCTGAGGCTTTGATGTTTTCTTGCT ATGCAGCATGTTGGGTGGTGGTCACCAACAATTATAAGAGGTGAAGACCGTGAAGCTATCCATATTCCAAACCACAAATTTACAGTTAATGTTGTACGAA ACCTCAGCCAGAAAACACATTGGCGGGTCAAAACCCACTTAGCCATTAGTCATTTGGATGTAAATAAGATTAATGTGAGTAGTAGTGTTGTTCTTTATAT TTAACTGGCTTTTCACGATAGTTCTGCCTTTTAGATAATTTTCCCTGTAACAGTTGGTTTGGTGCTTCTGCAGAACATAGTTGCTGACATGCGGAAAGTA TTATCCAAAAATCCTCAAGTTGAGCAGCAGAGGTTGCATAGGAGAGTATTTTTGGAAAACATAAATCCTGAAAATCAGGCTCTTTTGGTTAGTATTAAAT GGCTAGAATATCGTGCAATTCAATGATTCTGTGATTGTTGACAGGGATCTTAAATGAGATTTTATTCTTTGTTCCTCTTTTCTTTAAGTAGATCCTTGTG CCGTAAACAAGATAGAGGCAAGCATATTATGTATTAGTCTATGCTTGCATATATTTATATATAAGGTGTAATGTTTTTTCTATTATTTTCACAGATTCTG GTGTCTTGTTTTGTCA BLAST |
| Tissue | pods |
| Gene name | LI_gene_139943; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_426443
| Blastp | Mechanosensitive ion channel protein 2, chloroplastic from Arabidopsis with 60% of identity |
|---|---|
| Blastx | Mechanosensitive ion channel protein 2, chloroplastic from Arabidopsis with 60% of identity |
| Eggnog | Mechanosensitive ion channel(COG0668) |
| Kegg | Link to kegg annotations (AT5G10490) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019421399.1) |
| Pfam | Mechanosensitive ion channel (PF00924.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |