| Id Trinity | TRINITY_DN45548_c1_g3_i4 |
|---|---|
| Name Transcript | Ll_transcript_426520 |
| Sequence | TGCCTTGACCATACTTCCTCTGAAATTTCTTTATTTAGGGGTCTTGAAGGTGTTCGGTTTATGAGATCTACTTCTGTCTTTGCTGCTTCACCCCTGAAAG ACTTGGGGAGATTGGCATCTTGTAGCATGCATATGATCTTCTCTTCAATTGTGTGGTTCATCCTCTCACCTATTTCGTTCAATTGACGAGTCTTTGACGA TGTCTTCTCTAGTCTGATATCATAAGCCTTGCAATGGGCTTCAAATGGACCACGATACTCTCCACCATTGTCTACCTTCAGACACTTCAACTTCTTCTCT AGTTTCTTGGTCTTGCAAGAAACAAGCATGTGTAGCTCTAAGCACTGCTGAGGCTGAATATATAGCAGCAGGTAGTTGTTGTGTCCAAGTGTTGTGGCTT AAGCAACAATTACGAGATTATGGCTTAAGACTTAGGCTGCACTCCGTTGAATTGTGATAATACTAGTGCTATTAATCTCACAAAGAATCCAATTATGCAT TCTAGAACCAAACATATAGATATAAGGCATCACTTCCTAAGGGACCATGTTCAAAAGAAGGATGTATCTGTAGAATTTGTTGATACTCATAATCAACTAG CAGATATTTTCACTAAACCTTTGCAAAAGAACCTTTTTACAAAATTAGACTTGAATTAGGCATCCTTGATGAAGCTTACTTGTCCTAAATGCTTATTTAT ATGATTATATGTATGATTCACCATGTTATCTCATGCCTACTTGCACTTAATTGATTCCATTTATGTTTATATACTTCCATTTTTGGGTTAAAATCATT BLAST |
| Tissue | pods |
| Gene name | LI_gene_139950; |
| Additional information | - |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_426520
| Blastp | Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 55.1% of identity |
|---|---|
| Blastx | Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 55.56% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | Link to cantataDB annotations (CNT0002658) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_015970417.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |