Ll_transcript_425780

• Id Trinity: TRINITY_DN45554_c0_g1_i1
• Name Transcript: Ll_transcript_425780
• Sequence: AAAAAAGAAAGAAATTGAAAAGAGAGAGAGAGAGAAAAGTGAAAAACCCTGTTTCACTTCATCGCATTCATTCATTCATTCATCTCATTCTTCAATTGAG TACTAAATACATTAAATAATTTGGCCATGTTAACATAAAACCCTAACTTGGTGCCTCTTAATTTCACTCTCAATCACCACAAACCCTAGATTCAGAATCA GAATCACAATCCATGGCTGCCGAATTAGGTCAACAAACGGTGGAGCTATCCAAGCTGGTGAGTGCAACTGCGAATGAATCATATACTTCGCTCAAAGAAT TGGTCGATAAATGTAGGTCTTCTGATTTATCTGATACTGATAAGAAGATCAGCATGCTCAAATTCCTCACCAAGACTCAACAGCGTATGATTCGCCTCAA CGTTCTTTCCAAATGGTGTCAACAGGTTCCTTTGATACAGCACTGTCAGCAACTGGCTTCGACTGTTTCGAATCATGATATGTGTTTTACTCAAGCTTCA GATTCATTGTTTTTCATGCATGAGGGGCTTCAGCAAGCTCGTGCTCCGGTTTATGATGTTCCCTCGGCGGTTGAAATTCTCCTTACAGGAAGTTACCAGC GTATGCCAAAATGTATAGAAGATGTAGGTACTCAGCATACCTTGACTGAAGATCAGCAAAAGCCTGCTTTGAAGAAGCTGGACATGCTTGTAAGGTCAAA ATTGCTTGAAGTTTCTCTTCCGAAAGAGTTTTCTGACATTAAAGTTTCTGATGGTACGGCATTGGTTAGGGTGGATGGAGAGTTTAAGGTTTTACTGACC CTTGGTTACAGAGGAAACCTATCCTTGTGGAGGATATTACATTTGGAATTGCTTGTTGGTGAAAAAAATAAACCTGTGAAATTGGAAGCAGTACGATCTC ATGTACTTGGAGACGATCTTCAGAGACGAATGGCGGCAACAGAAAATCCATTTTCAATATTGTACTCAGTCCTTCATGAGCTATGTGTTGCACTTGTCAT GGACACTCTCCTAAGGCAAGTGCAAGTTCTTCGACAGGGGAGATGGAAAGATGCGATTAAGTTTGAGCTCATTACCGAGGGTGGCATGGGTCATGGAGCA AGCTCTAGTTCTGTTCAGAACCCTGAGGGTGAATCTGATTCACCTGCTCTGCGGACTCCAGGGTTAAAAATTATATACTGGTTAGATTTTGATAAAAATG GTAGTATGCCTGACTCAGGTGCATGCCCGTTTATAAAAATTGAACCTGGTTCAGATCTTCAGATAAGGTGTCAGCACAGTAACTTTGTCATAGATCCATT AACGGGAAAGGAGGCAGATCTTTCTTTGGACCAGAGCTGTATTGATGTTGAGAGGTTACTGTTAAGGGCTATTTGTTGCAACAGATATACTCGCCTACTG GAAATTAAAAGAGAACTGGGAAAAAATATTCAGGTCTGTCGAACAGCAGACGATGTTGTGCTCCAGTCTTGTGTGAGTGAACCAGATATTGAATACAATC AGAAGGAGGATAAGTGTTGCAGCAAGGACTCTGACGGGCATGAGGTATTGCGTGTGCGTGCCTATGGCTCATCCTTTTTTACTCTTGGAATTAATATCAG AAATGGCCGTTTTCTTCTCCAATCATCACAAAACATAGTTGCTTCTTCAGCTCTGTTAGAATGCGAAGAAGCTTTAAACCAGGGATCTATGACTGCAGCT GAGGTCTTCATAAGCTTGAGAAGCAAGAGTATATTGCACTTATTTGCATCTATCGGAAGAGTTTTAGGCCTTCAGGTATACGAGCATGGATTTAGCGCAG TTAAAATTCCAAAGAACATTTTGAATGGTTCAGCTATGGTGATGATGGCATTTCCAGATTGTGGAAGCTCTTACTTTCTGCTGATGCAACTTGATAAGGA TTTCAAGCCCTTGTTTAAGTTGTTAGAGACTCAGCCAGATCCATCTGCAAAAGATAATTTATTTGGAGACCTTAATCAAGTGCTGCGGAACAAGAAAATC GATATAGGACAGATTCAGGTGCATGAAGATGAAATGAATTGCCTGGTTGACTGGGGAAAATTATGCCCGCTTTTGCCAAATGCTGCTTGCCCGAATCAAA CATCTGGACATGAATTTCTTTCTGACATTCAGATTGAGAGTTCCATGCAGATTGCAAGAGGCCATACATCAGGTTTTTCGTCCCTTGTTGATGAAGTGTT TGGACATGAAAGAGGGTCTTCTGTGGCTTCATTCTCTGTTAAAGATCACTCTTCATCCTTGAATGCATCACTAACTTCTCATTATGGTTCTGTCCCAATG AATTTCCATAGTTTAAAAGCCGGAACTCCATCTCCAAATTGGGAAGGAGGCATGCAGATATCACAGGTTAATAATGTAACCAAAGCTTCTGGTGTTCCTA CGCACTATAGTGGTTCCTTCTTCTCATCAGGCAATGTGAAGGGCCCATTCCAATCTGGCCCTGTTGCCTCAATTTCTGCCGGGCAAGTAAGGAACACAGC TGGGAAAAGGCTACCTGCTTCAAAGTCTGAACAGGATTTGTCTTCTCTTAAATCACCACATTTCGTTGACATTAGTTCCTCTACTGCAATGGAGGAAGAT CAGTTAAGAGTGTTGACTGATACTTCTACTGATGGTGGAAGTCGGCCATCACAACTACTATCTCCATCCCGACCAACTGCCTCTCGAATGTCTGTACCCA ATTCCAGACCTAATGCACCTCACCTTGAATCATTCAAGGCTGCTGGATCTAGTTCATGTGTTACAATACCCCAGGCAGTGGAATCCACAGTTAACTATAG CACCAGTGAAGATGTCAGCTCCAAGCATGATAAAAAATCTCGGAAACGGACAGCTTCAGATATGTTGAATTTGATCCCATCTCTTCAAGGTCTTGAAAAC AACTCAAGAATCTACAAGAGAAGAAATATTTCAGATTTGTCTGGCTCTCAACTCTCTCTGAAACAAAGTCTTATATCTACTGAAATGATACCAAAAGCTG AAGCATACAATTATGGTAGTTTAATTGTGGAAGCAAATAAAGGAAATGCTCCATCTAGCATTTATATAGCAGCCCTTCTACTTGTTGTCAGGCACTGTTC ACTTTGCATTAAGCATGCTAGACTAACCAGCCAGATGGATGCATTAGACATCTCATATGTTGAAGAAGTAGGTTTAAGAAGTGCATCCTCTAACATTTGG TTCCGACTTCCATCCGCTAGAGGTGATTCTTGGCAGCATATATGTTTGCGACTGGGAAGACCTGGTTGTGTGTATTGGGATGTTAAAATAAGTGACCAGC ATTTCAGGGACCTATGGGAGCTTCAGAAGGGGAGCAGTAATACACCATGGGGTTCCGGTGTTCGAATTGCTAATACATCTGACATAGACTCCCATATACA TTATGATCCTGATGGTGTTGTTCTGAGTTTTCAATCGGTTGAGGTAGATAGTGTAAAGAAATTAGTGGCCGATATCCAAAGGCTTGCAAATGCAAGAACA TTTGCCCTTGGCATGCGGAAATTGCTTGGTACAAGAGCAGATGAGAAGTCAGAAGAGCTCATTTCTAGTTCTGATGTCAAAGTATCTGGTGCCAAGGTTG GCACAGATACTTCAGACAGACTATCTGAACAGATGAGAAAGGCATTTAAAATTGAGGCAGTTGGACTGATGAGTCTGTGGTTTAGCTTTGGTTCAAGTGT ACTTGCTCGATTTGTTGTTGAGTGGGAATCTGGTAAAGAGGGTTGCACAATGCATGTGTCTCCTGACCAACTTTGGCCTCATACCAAGGTTTGTTTATTT CTCTTCAACTGATTGCTGCTTGTTTCTTGATTTTTTTCCAATTCTGGTTATTTGGTGTCATCAATAGATTCATACTTGTCTCTCATGCTTTGTAGTATTT TATAATTATGTGAAACATGCTACGTTATCACTCATGATTGTTGGCTTCAATCTGTTTTCTCGATTCACTGTGTTTGTTATTTCCCTCCTCTATTCTTGGA TTTATTTTCCCTTCCATGAGGATTAATAGTTTAATACACACAATCTTGCAAAGTAATAGTTTTTCTTTGACTGTGGCTGCTCCATATCTAGTTTACTCTG ATTATTCGTCCTAGAAGACCCATGTGGTAATGTTTTAAAACTGAGACTAGTTTGGTGACGCAAGGACCAAAATGATGATACCTTTCGAGAACCAAAGTGT GGTTTACTCTTAGTTTAATTTTAATGACTATTTCTGCTGATGTACACAAGTTGTTCTTGATGCCAATTCCCCCCAGATATTTCAGTGTTGGTATGTAACC ACCTTACTTAATGCAAACTTGTATTATATATATTGTCCTGGTTACTTCCCAACCATGCTCTCAAGTAAAAGTTTTAGCCTATTTACAATATCTGATGCTT GTGTTCTGTACAGTTTCTAGAAGATTTCATAAATGGAGGTGAAGTTTCACCACTATTGGACTGCATTCGGTTGACTGCGGGACCCTTGCATGCCCTGGCA GCTGCAACCAGACCAGCAAGAGCTGGTCCTGTTCCAGGTGTTGCTGCTGCTCTATCTTTTATTCCTAAACAGACAGGTTATTTATCACCACAGGGACTTC TGGTTGGTAGTTCATCCACAAGTGTTGGTCAACCTACTGCTGGTCCAGGGGTTAACACTGTCATGACTACTCCTAGTGGCCTCACTAATCAAACACTTTC AATGCTAGTTGCTGCTGGGCGTGGTGGCCCAGGCATTGTCCCGAGTTCACTTTTGCCCATCGATGTCTCTGTTGTGCTTCGTGGCCCCTATTGGATACGG ATCATGTATAGGAAACATTTTGCAGTTGATATGCGTTGCTTTGCTGGAGATCAGGTGTGGTTGCAGCCTGCAACACCACCTAAAGAGGGTTGTACTTCGG GAGGGTCATTACCGTGTCCGCAGTTCCGGCCTTTCATCATGGAACATGTTGCCCAGGAATTGAATGGATTAGATCCTAGTTTCACTGGGCAACAGTCAGG TGGGCTGGCAAATTCAAATAATCCAAACTCTGGTTCAGGGTCCCAGCAAATGGCTGCAAATGGAAATAGAATGAACCTGCCAACTTCTGCCACAATGTCT AGGACTGGTAATCAATTAGCAGGTTTAAGTCGTGTGGGAAATGCTTTGGCAGGATCTTCAAATTTAGCTTTGATGACATCAGCAGTCTCTCTACGTAGGC CACCTGGAACGATTGTCCCTGCACATGTCAGAGGCGAGCTGAACACAGCCATTATTGGCCTTGGTGATGATGGAGGATATGGAGGTGGTTGGGTTCCTCT TGTTGCTCTTAAGAAGGTCCTTAGGGGTATTCTCAAATATCTTGGAGTGCTATGGCTATTTTCACAGTTACCTGATCTTTTGAAAGAGATCCTAGGATCC ATTTTGAAGGAAAATGAAGGTGCACTTCTAAACTTGGACCCTGAGCAACCTGCATTACGTTTTTTTGTTGGAGGCTATGTATTTGCTGTTAGTGTCCATA GAGTTCAGCTTCTTCTTCAGGTGTTAAGTGTAAAACGGTTTCATCAGCAACAGCAGCAACACGCAAATCCTGCACAAGACGAATTAACCCAAACTGAAAT AAGTGAAATATGTGACTACTTCAGCCGTCGGGTTGCCTCAGAGCCATATGATGCTTCTCGTGTTGCATCATTCATAACTATGCTCACTTTACCTGTATCA GTTCTCAGAGAATTCTTGAAATTGATAGCATGGAAAAAGGGCATATCCCAGGCACAAGTGGGAGATGTTGTTTCAGTTCAAAAGCCTCGGATTGAATTAT GTCTTGAAAATCACTCTGGGTTGAACGTTGATGATAGTTCAGAGAGCTCATCTGCATTCAAAAGCAACATCCATTATGACCGCCTGCATAATTCTGTTGA CTTTGCACTTACCGTTGTTCTTGATTCTGCTCACATCCCTCATGTCAACGCCGCTGGTGGTGCTGCTTGGTTGCCATACTGTGTTTCAGTAAGCTTGAGA TATTCATTTGGAGAAACCCCTAATGTAACCTTTCTTGGCATGGATGGTAGCCATGGAGGTAGAGCATGTTGGTTGCATGTTGATGATTGGGAGAAGTGTA AGCAGAGGGTGGCAAGAACAGTGGAGGTTAATGGGAATGCAGCAGCAGCAGCAGATATAAGTCAAGGTAGGTTGAAATTAATTGCAGACAGTGTGCAAAG AACTCTGCATATGTGCATTCAAGGGCAAAGAGATGGTAGTGGAGTTACATCTAGCTCTGGAGCAACATGATTAGGGTTTTACTATCAGAAGTGGTTATAT ATATATAATGTTGGGTTGGGTTGGGTTAGTTCTGTCAATATTGCATTTTAGTTTTACTATGATCTGAAACAGTGGCATGCTGAATTAAGCATGTTAGTTT TGGTGTAATGGAGAAAGTGCATGTCACAGTATTAGATGATTTTGATAAAAATTCTTTTAAGGAGATTGAGATTTTACAGTCATTTTTAGATAAGATTGAT GATGAGTAAGAAGAGTACATTATGTTGCTGATGTTGCTGATGGAGTATAAACTTTCTTTAGTCTTGTACAGATGAAATTATTAGTTAAATGAAACTTGTA ATGAAGGATTTGGCGTGTATTTTATTATTTTCACATCCTAGATTTAATGAAATAAACCCTACTTTTTGTTTTAAAA
• Tissue: pods
• Gene name: LI_gene_139967;
• Additional information: details;

Expression of Ll_transcript_425780

FPKM

• PAB: 0.1
• PNAB: 0.1
• PS1: 0.7
• PS2: 0.1
• PS3: 0.4
• PW1: 0.2
• PW2: 0.1
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_425780

• Blastp: Mediator of RNA polymerase II transcription subunit 14 from Arabidopsis with 56.59% of identity
• Blastx: Mediator of RNA polymerase II transcription subunit 14 from Arabidopsis with 55.96% of identity
• Eggnog: Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors(ENOG410XWK4)
• Kegg: Link to kegg annotations (AT3G04740)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019431890.1)
• Pfam: Mediator complex subunit MED14 (PF08638.10)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;