Ll_transcript_426055

• Id Trinity: TRINITY_DN45572_c0_g1_i4
• Name Transcript: Ll_transcript_426055
• Sequence: CTTATATTCACGATTCCTCAAAAGTTGGTGTCTGTACTAAGTTTCTGGATAGTTCATAAGGTTGACAGATAAGGTTTTGTTCTGGATAGTTCATAAGGTT CCTCATATGAGTAAGCAACATTATTTGACAATGATCCCTTGGATTTAGAGTTTGATAATCTGAATTAACTTATCCACTAGGTTCTTATAATGAACAATAG TTTTCATTACTTAGGCAAGTGGTGAGAGACTCAAGACAATTGTCAATGAAATAATGCAGGGTTTTCTTTCTTGTATGTTTCATTTCTTTGTTTTATTTTT TAGAGGATGAGACTCAAGTCTTCTTTTTTTTTTTTTTTTTTCTTAGGCAAAAGATTCTTATAATGGTCTTTTCTTTCTTCTCTTACCACATAAATTTCAA TCCACTTATATAACAAATCTTATCCAAAGTATAAGAATGCTAGCTACTGAAACAAACTAATAATACCCTCTTATAAATCCTTGGTATTAAAAGCAACCAA AAACTAAAAGTTTCTACAGCTTAGCCTAGGACAAGAATTTAGTCATGGCAACAAGTTGCTCCTACATGGTTTCAACCAAGTTATCCATGTTATGTAATTG GGCAGGAGGAAAAAGAGAATTAGTGAGAAACAAGAGAGCATTTTTCATTTCAGCTCAGCAACAAACAGATATTAAAGAAGCAGATAATGTGCAAGAACAA GTAGAAAGTAGTGAGAAAGTGAAGCCAAAAGGAACACCACTAAGGCCAGTGGAACCACAGTTGAATGTGAAAAGCAAAAACATGGGCAGAGAATATGGAG GGCAGTGGCTAAGTTCTGCCACACGCCATGTTAGGATCTATGCTGCATATATTGACCCAGAGACTTGTGAGTTTGATCAAACTCAGATGGATAAATTGAC CCTTATTCTTGACCCTACTAATGAGTTTGTGTGGAATTCTGAGACCTGTAATCAGGTTTATTCTTACTTCCAAGAGCTTGTAGATCACTATGAGGGTGCT CCACTGACAGAATACACTCTTAGGCTGATTGGGTCAGACATAGAGCACTATATAAGGAAGATGTTATATGATGGGGAAATCAAGTATAACATGAATGCAA AAGTGTTGAATTTCAGCATGGGAAAGCCAAGGATCTTGCTCAACAATGATATCCCAAATGAAGATACACTTGATAAATGATTTATGGTATATATCAACAA CAAACAAATTATCTTGCTTATATATGATTTTGTCCAAATATCAATACAATGGCTAGTTCTTTGGTCAAGGTATATAAATTATAACAATTTCTTGTGCAGC ATTATTCTACTACTATCAACTATATTCATCTAAATTTCTTGTTACTCTATTTCCATTTTACTTCACTATATTCCATTAAATTTTGTTACAACCTAAGATA ACTAAACAAAAGTAAACAACTACTGTGTACTATAACAAAAGATGTTCACCGTTGACCCAACTAAAGTAGAGTTTTTAAAAGTGGACTTGTATTTAAAATG AGAAAATAAGATTGTAATCATAATTTTCTTTGTTTTTTCAGAATATTCTTTCATTCTACCGGGTGAATAATAAGTTGTTCTAAGCAGTGACATTAAAAGT TTTGCAGGGTTTGAGTGTGGGTATTAGCTATAAGTAGTAACATTGTTATTTTTGTTCATAAGTTTTGTCCCCAAATCCAATAGGGTGATTATTTTTACAT TCCAACTTCACAATCCAAGGTGTAAAGATTCTGAGCCCTTTTGTATTTTGAAATTTATGCAGATTCCTCATGTGTGAATAGTGATGAAAAAACAGGCAAA GTAGTGGGCTAAAATTATGGGTTGGACACAATTTTAGTTAGTTTATCAATTTTGCCCGACTCTTTGTCACGGAATCGCAACCGACCCTTAGTTTGAGAAT TGAATTTTGAAAGGAAAGAAAGAAAAAGAGAAGGTTTGGAAGCCATAAAATATGTTTATGAAATAACTCTTAAGTCTTTCATTTTTATTTTGCCCCCTTC AATATTCAACTCCAAATAAATCCTAAATATAAGAAGAGAACCAAAATTGTAAAAAAATTATTGCCTTAAAAATTTTGTGATGTTCAGGTG
• Tissue: pods
• Gene name: LI_gene_140033;
• Additional information: details;

Expression of Ll_transcript_426055

FPKM

• PAB: 7.1
• PNAB: 0.5
• PS1: 0.2
• PS2: 0.1
• PS3: 0.5
• PW1: 1.7
• PW2: 2.1
• PW3: 2.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_426055

• Blastp: NAD(P)H-quinone oxidoreductase subunit M, chloroplastic from Vitis with 77.67% of identity
• Blastx: NAD(P)H-quinone oxidoreductase subunit M, chloroplastic from Vitis with 77.67% of identity
• Eggnog: electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon- concentration (By similarity)(ENOG4111NC5)
• Kegg: Link to kegg annotations (100264425)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019415947.1)
• Pfam: Cyanobacterial and plastid NDH-1 subunit M (PF10664.8)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;