| Id Trinity | TRINITY_DN45596_c1_g4_i1 |
|---|---|
| Name Transcript | Ll_transcript_425833 |
| Sequence | CTCTGGAGGGATTCAACCAAGGATTGCAATAGCACCGCCTAAGCAGGCACTTTTTCCTCACACTTTTTAGCTGCTCCTTTGATTACCTACTAAGTGGGTG TTAAATAGGAGCTGCTTAATTCAACAATGCCTGGGGCAGATGATGATGCTAAGAGGAATAAGAGACTTGCCATTATTGGGGTCTCAACATTCTTAATGGT GGCTATGGTAATAGGTGTAACCGTTAGTATCAGCTCCAGTAAGGATGTGCTCAATGAAGAAGATCCAAAAGATAACAGCAAATCTCATGTATCATCCACA ATGAAAGCTGTTATATCTCTTTGTCAACCCACAGATTATAGAGAAGAATGTGTTGATAATCTTTCTAAGGAGGCTGGAAATACTACTGACCCAAGAGAGC TTATACAAATTGCATTCCAAATAACTATTAACAGAATTGGGGAGGGACTTAAGAAAACAAATCTTTTGCAAGAGGTTGAGAAAGACCCTAGGGCTAAGGG GGCTCTTGTTACATGCAAGCAACTCATGGATCTTTCAATTGGGGAGTTCAATAGGTCACTTGACAAATTGGGCAAATTTAATCTCAACAACCTTGACAAC ATCCTCACAAGTTTGAAGGTTTGGCTTAGTGGTGCAGTCACATACCAAGAGACTTGTTTGGATGCATTTGAGAACACCACTTCTCAAGCTGGTAATAAGA TGAAGGAAATATTGCAAACTTCTATGCACATGAGCAGCAATGGTCTTGCCATCATCAATGAGCTTTCTAAAACTCTTGCATCTTTGCATATCACAAAAAC TTCGGGCCGCCGTCTCCTCCTGGATGCTGATGATTTACCAGTTCTTGGTCACGGTGATGATGACCTTCCTGAATGGGTTGAGGATGGTGTTGGTGTTCGT AGACTTCTTAAAATGAATTCAAGAAAATACATGGCTAATATCATTGTTGCCAAAGATGGTAGTGGAAATTTCACCAAAATTAGTGAGGCATTGAAGCATG TTCCTAAGAAGAATCAAAAGTCATTCATTATATGGATCAAGGAAGGTGTTTATCATGAGTATGTACAAGTTACTAAGGATATGACTCATGTTGTGTTTGT TGGTGATGGTTCCAAAAAGACAAGGATCACTGGTAACAAGAATTTCATTGATGGAATTAACACTTACAATACAGCCACTGTTGCTGTTCAAGGAGATTAC TTTGTTGGCATTGGCGTTGGGTTTGAGAACTCTGCTGGTGCACACAAACATCAAGCAGTTGCATTAAGAGTTCAAGCTGATAAGTCCATCTTCTACAAAT GCAGAATGGATGGGTTCCAAGACACACTTTATGCACATGCATTGCGTCAATTCTATAGAGATTGCACTATTTCAGGTACCATTGACTTTGTCTTCGGTGA TGCAGTTGCTGTTTTCCAAAACTGCACTTTTGTGGTTAGAAAACCAATGCAAAACCAGCAATGCATTGTGACTGCACAAGGCAGGAAGGAGAGGTACCAA CCATCAGGAATAGTTATCCAAGGTGGTGCCATTGTATCAGACCCTAACTATTACCCAGTGAGGTTTGACAACAAGGCTTATTTGGCTCGTCCATGGAAGA ATTTCTCAAGAACCATTTTCTTAGACACTTACATTGGTGACTTGATCCAACCTGAAGGATACATGCCATGGCAAACAGATAAAGGACTCCCTACAAATAC AGAAACTTGTTTCTATGCTGAGGTTAATAATCGTGGCCCTGGTTCAGACCTAGCCAAGCGTGTAAAATGGCAAGGTGTGAAGAACCTTACACCACAAATA GCAACAGATTTCTATCCATCAAGATTCTTCCATGGTGATGATTGGATTAGGGTTACTAATATTCCTTACTCCTCTGGCAAGAACCCCTCTAAGCATTAAA TGAATTCATTTTTTGGAAGGGTGCTGCTTCTGTGTTGTAAAAAGAAAAACAATGTAGTGCATGTTTGGTTTATAGTTTGCATCCTTCAAATTAAACCATG GTTTAGTGGATTCAAACTAATAAATTTCATCTTTGTTCTTTATATACATTTAGTTGAATTACTTTTATATGTGCTGTTTGTAACTAAGAAGAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_140084; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_425833
| Blastp | Probable pectinesterase/pectinesterase inhibitor 21 from Arabidopsis with 48.46% of identity |
|---|---|
| Blastx | Probable pectinesterase/pectinesterase inhibitor 21 from Arabidopsis with 48.46% of identity |
| Eggnog | pectinesterase(COG4677) |
| Kegg | Link to kegg annotations (AT3G05610) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019422857.1) |
| Pfam | Plant invertase/pectin methylesterase inhibitor (PF04043.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |