Id Trinity | TRINITY_DN45605_c0_g2_i3 |
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Name Transcript | Ll_transcript_413003 |
Sequence | AAAAAATATTCACTCATAACTTACATTTTGCACTTGCCTATTTCAAACCTCATTTTGGTAAATTACTCTAATGCCACCCTTATTTCTTCTCGTGAACACA CATGTAATATCATTTTCTATGAGCTAGTAGTGTAACATAACATCTACCATTCATTATATTTTTCACAACTATGCTATCCTTATAATAAAAAAGCATAGTC ATATCTTAATACAAAGATATCAATATAACTCAATCTCAGGAAGAAAAAGAATGACTGGTTTCCAGTTTCATTGGAAAGTGTTAAGTTTGTTGATTTCAGT TTCCTATTGCTTAGGAAACAATGACATACAAGTTCAGTTGAATGATGATGTTCTTGGTCTGGTTGTGTTCAAATCAGATATTCATGACCCTTCTTCTTAT CTTGCTTCATGGAATGAAGATGATGTTAATCCTTGTTCATGGAAGTTCATACAATGCAATCCTCAGAATGGAAGAGTTTCTGAGGTATCATTAGATGGTT TAGGATTATCTGGTAAGATAGGAAGAGGTCTTGAAAAGTTGCAGCATCTAAAGGTATTGTCCCTTTCTCATAACAACTTTAGTGGGAGTATTAGTCCAGC ACTTACTCTTCCTAGTAGTCTTCAAAGGCTGAATCTTAGTCATAATGGTTTTTATGGTCCATTACCTTCTTCTTTTGTGAATATGAGTGCAATAAGGTTT CTTGATCTCTCTGAGAATTCATTTTCAGGACCAATCCCTTACAATATTTTTTATGGCTGTTTTTCCCTTCATTACCTTTCTTTAGCTAGGAATATGTTTG AAGGGTCAATTCCTAGCACACTTTCTAGATGTTCCATTTTGAATAGCCTCAATCTTTCCGATAACCGATTCGATGGTTATGTTGAGTTTACTGCAATTTG GTCATTAAAAAGACTTAGGAATTTGGATCTATCCAACAATTCTTTGTCTGGGTACTTAACTAATGGAACTTCAGCCATATATAACCTGAAAGAGATCCTG TTACATGGTAACCAGTTTTCAGGTCCATTACCTTCTGATATTGGTCTCTGCCTGCATTTGAATAGGTTGGATTTTAGTCATAATCAGTTCAGTGGAGAAC TACCAGAGTCACTTGGGAGGCTTAGTTCATTGAGCTATTTCAAGGCATCGAATAATGTTTTAACCGGTGAACTGCCGCAGTCAATTGGTAAGATGACAAA TCTGGAATACCTTGACCTGTCAAACAATAAATTCACCGGAAGCATCCCTCAATCACTAGGGGAACTGATATCACTGACTTATCTAAGCATTTCAAATAAC AAGCTTGTAGGAAATATTCCATTGTCATTGGTTTCTTGCACGAAGTTATCAGTGATTAGGCTCGAAGGTAATCGTTTCAATGGCAGCATACCAGAGGGTC TGTTTGGCCTGGGATTGGAGAAAATAGACTTATCCAATAATGATCTGACAGGTTCAATTCCAGCAGGCTCAAACAGGCTCTTGGAAACTCTCACTGATTT GGATCTTTCGAAGAACCATCTCCAGGGAATTATCCCTGCAGAAATTGGTTCTCTTTCCAAATTAAGATATTTGAATTTGTCTTGGAATGAACTTCATTCA CAGATGCCTCCAGAATTTGGTATCCTTCAGAATCTAACAGTTTTAGATCTACGAAGCAGCGCCTTATATGGTGTTATTCCGGATGGTATATGTGATTCAG GCAATTTAGCCATTCTTGAACTGGATGGAAATTCATTGAAGGGGTCTATTCCTCAGGAGATTGGAAATTGTTCATCACTTTACTTACTGAGTTTGTCTCA CAATAATTTGAGTGATTCAATTCCAAGGTCAATGTCAAAGCTAAACAATCTCAAAATCCTCAGATTAGAATTCAATGAACTAAGTGGAGAGATACCGATG GAGTTCGGAATGCTACAAAATCTTCTTGCTGCGAATATATCGTATAACAGGCTCACTGGCAGGCTTCCAACTGGTAGCATATTTCCAAACTTGGACAAAA CTTCATTGGAAGGAAACCTTGGTCTATGCTCACCTTTGTTGAAGGGTCCATGTAAGATGAATGTGCAAAAGCCACTCGTGCTTAATCCAAATGCATTTAA CAACCAAGCAGGTTCTGATAGGCACAGAAATGAATCATCTATGTCTAGCACAATTCATCACCACATGTTCCTTAGTGTTTCTGCTATTATAGCAATTTCA GCATCCTTTGTTATCATATTAGGAGTGGTTGTTATTTGTCTACTTAATGTTTCTGTGAGGAAAAGGCTATCATTTGTGGACAATGCTTTGGAAAGCATGT TCTCAAGCTCTTCTATATCTGGAAATCCACCCTCAGGAAAACTTATTCTGTTTGATTCGCATTCCTCGCTCGACGGGTTCAGCAATCCAGAATCCTTGCT CAACAAGGCATCTGAGATTGGAGAAGGGGTGTTTGGAACAGTGTACAAGATTCCATTGGGATCACATGGTAGAATGGTAGCTATGAAGAAGCTTATAACC TCAAACATAATCCAATATCCCGAAGACTTTGACAGGGAAGTTCGGATCCTAGGAAAAGCAAGGCATCCAAATCTAATTGAATTGAAAGGATACTACTGGA CTACTCAGCTTCAGATTTTAGTAACAGAATATGCACCAAACGGTAGCTTGCAATGCAAGCTACATGAAAGGCTTCCTTCAACTCCTCCTCTTTCATGGCC TAATAGATTCAAGATTTTACTTGGAACAGCAAAGGGGCTAGCACATTTGCACCATTCGTACCGTCCACCAATCATCCACTACAACATAAAGCCAAGCAAC ATTTTACTCGACGAAGATCACAACCCAAAGATCTCTGATTTCGGGTTGGCTCGGCTTCTGACAAAGCTAGACAAGCATGTGATGAGCAATAGGTTTAAAA GTGCAGTAGGATATGTTGCACCAGAATTAGCATGCCAAAGCATAAGGGTGAATGAGAAATGTGATGTGTATGGTTTTGGAGTGATGATCCTTGAGTTAGT GACAGGAAAAAGGCCAGTTGAGTATGGAGAAGATAATGTGTTGATACTGAATGAGCATGTAAGGATTCTTCTTGAGCAAGGTAATGTATTGGAATGTGTG GATCCAACAATGAGTGAGTATCCAGATGATGAAGTACTTCCAGTTCTGAAGCTTGCAATGGTGTGTATCTCTCAAATACCTTCTAGCAGGCCTTCTATGA CAGAAGTGGTGCAAATACTTCAACTCATTCAAACTCCAGTTACTCATAGGATGGAAATGTTTTAAGTACATATGCTTTCTTTGTTTAATTAGCTCCAAGT TCACAAAAAAAGAACTTGGCTTTCTTCAAATTAGTATTTTATGTATTCTTTTTTTCTCTCGTCCGCAAATAATCTTTTCGCTGATGATAAGGTTACATAC CTTAGACCCTATTAGGTGAAAGTCTCATGCACGGGGTTGCTCTGTTTATTTTGTGTATTGTTTTTTAACTTTCCTTCACGATTTGGTTTGTGTGGACTGT TCAGTCAACTGAGTCAAGTACACCATTGATTTAAGTTAGTTATTCTGAAATTTGTATAAAGATACTTAGAATCAATGGGGAAATGAAGATATTTTCAGAA CATGCTCTAGGAATATAGAGTGATGGAGAAGTTCATTGTTGAAAGGATAAAAGAATGGCTTTACTTGTGCAATACAAAGTACAAACAAAGAAAGACAAAT CTCCAAACTAGAGGGATTTGATGTAACTTTTTATACTCCTGGTTCTATCAAAATTGTATTTTCTAAGTGAAAGATGCTTGGATTTAAACATGTCATTTGT TTTTTATACCATATTTGAAAAACAATTTGTCTGATTTGCTT BLAST |
Tissue | pods |
Gene name | LI_gene_140107; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_413003
Blastp | Probably inactive leucine-rich repeat receptor-like protein kinase At3g28040 from Arabidopsis with 61.64% of identity |
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Blastx | Probably inactive leucine-rich repeat receptor-like protein kinase At3g28040 from Arabidopsis with 60.99% of identity |
Eggnog | Serine Threonine protein kinase(COG0515) |
Kegg | Link to kegg annotations (AT3G28040) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019419585.1) |
Pfam | Leucine rich repeat N-terminal domain (PF08263.11) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |